Clostridioides difficile R20291: CDR20291_3222
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Entry
CDR20291_3222 CDS
T00998
Name
(GenBank) putative ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdl03019
]
CDR20291_3222
Messenger RNA biogenesis [BR:
cdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CDR20291_3222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_28
SKI
HTH_58
Motif
Other DBs
NCBI-ProteinID:
CBE07140
UniProt:
A0A9R0BNE9
LinkDB
All DBs
Position
complement(3843689..3844546)
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AA seq
285 aa
AA seq
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MKFVIVTGLSGSGKSETMRALEDMGFYCVDNLPPALITKFAELCYQPNSSIDKVALGIDI
RGRKFFEALHESLNYLEKENYEYEMVYLDCNDDVLLKRYKMTRRNHPLAKDMQIPEGIKM
ERKIMEPLKELSTCIIDTTNMKPKDLKEEIKKIYSSGEDNPNLTISVVSFGFKHGILADA
DLVFDVRFLPNPYYVEELRAKTGDDKEVRDYVMNSKISEEFYVKLLDMIHFLVPQYIDEG
KQHLVIGVGCTGGRHRSVTITNLIAEDLSNKGYRVVKKHRDSMLR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttatagttacaggtctttcaggatctggaaaaagtgagacaatgagagct
ttagaggatatgggattttattgtgtagataatctacctcctgctttgataactaaattt
gcagaattatgttatcaaccaaattcaagtattgataaagttgctctagggatagatata
agagggagaaagttttttgaagcgcttcatgaaagcttaaattatttagaaaaagaaaat
tatgaatatgaaatggtatatttggactgtaatgatgatgtattgttaaagagatataaa
atgacaagaagaaatcatccattggcaaaagatatgcagattccagaaggtataaaaatg
gaaagaaagataatggaacctttaaaggagttatctacatgtataattgatacaactaac
atgaaacctaaagaccttaaggaagaaataaagaaaatatattcttctggtgaagataat
ccaaacctaactatttctgtagtatcttttggatttaaacatggtatacttgctgatgca
gatttagtatttgatgtaagatttcttccaaatccctattatgttgaagagttaagagct
aaaactggtgatgataaagaagttagagattatgttatgaattctaaaatcagtgaagaa
ttttatgtgaaacttttagatatgattcattttttagtacctcaatatatagatgaagga
aaacaacatctagtaattggtgttggatgcacaggtggaagacataggtcagttactata
acaaatcttatagcggaggatttatctaataagggatatagagttgtaaagaaacataga
gactctatgttgcgataa
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