Clostridioides difficile R20291: CDR20291_3333
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Entry
CDR20291_3333 CDS
T00998
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdl03032
]
CDR20291_3333 (hupA)
03036 Chromosome and associated proteins [BR:
cdl03036
]
CDR20291_3333 (hupA)
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_3333 (hupA)
DNA replication proteins [BR:
cdl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDR20291_3333 (hupA)
Chromosome and associated proteins [BR:
cdl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CDR20291_3333 (hupA)
DNA repair and recombination proteins [BR:
cdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CDR20291_3333 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Peptidase_C80
HU-CCDC81_euk_1
HK-GC-Chemotax_sensor
Motif
Other DBs
NCBI-ProteinID:
CBE07338
UniProt:
A0A9R0CG40
LinkDB
All DBs
Position
complement(3965506..3965784)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKAELVSKMAEKSGLTKKEAEAALNAFMSSVQDALVNNEKVQLVGFGTFETRERAARQG
RNPRDPEQVIDIPASKAPVFKAGKGLKDIING
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagctgaattagtatcaaagatggcagaaaaaagtggattaacaaagaaggaa
gcagaagctgcgttaaacgcatttatgagttctgttcaagatgcactagtaaataatgaa
aaagttcaattagttggatttggaacatttgagacaagagaaagagctgctagacaagga
agaaatccaagagatccagagcaagttatagatataccagcttctaaagcaccagttttc
aaagctggaaaaggattaaaggatataataaatggataa
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