Clostridioides difficile R20291: CDR20291_3348
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Entry
CDR20291_3348 CDS
T00998
Name
(GenBank) type IV pilus assembly protein
KO
K02653
type IV pilus assembly protein PilC
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdl02044
]
CDR20291_3348
02035 Bacterial motility proteins [BR:
cdl02035
]
CDR20291_3348
Secretion system [BR:
cdl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CDR20291_3348
Bacterial motility proteins [BR:
cdl02035
]
Pilus system
Pilus assembly proteins
CDR20291_3348
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF3829
DUF4492
Motif
Other DBs
NCBI-ProteinID:
CBE07364
UniProt:
A0A9R0CG42
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All DBs
Position
complement(3982868..3984076)
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AA seq
402 aa
AA seq
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MKSFKYTVIKEDGKKQTDVIEANDFNEARNLLRKRNLRVIEIKESKNKNIRLSSRKRKKD
LGADQISHFCRQFAIIVSSGINSISGLETLARRSTNITLREEINRIVAEIKVGSTIADSM
LSSKSKFPKLLGAMVATGEATGKLDEVLKSMASFYASEHRVKQKLRNAATYPLIVLISSF
IMIFIFTTFMVPKMINSITTVGATLPLITRIVMGFGMFMKKFWIIVLLVIILFIYQFKKY
LKTSVGRAHKDRVINKIPVLGKGINCMVATRFSRALYLFVSTGYPLVQGLDYIIDSVNNT
MAEKILASAKDGITRGEGLAENLERYTYFDSVLVQMIAIGEQTGELENISRQMAEFYEYE
SEIYLNRMASMIEPVLIIAVGIIVAILVVSIFMPMLSIYDAM
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttttaaatacacagtaataaaagaggacggaaaaaagcaaactgatgtgatt
gaagccaacgattttaatgaagctagaaatcttcttagaaagagaaatcttagagttatt
gaaatcaaagaaagcaaaaataaaaatataagattatctagtagaaagagaaaaaaagac
ttgggagctgaccagataagccacttttgtagacagtttgctattatagtatcttctggt
ataaatagtatttcaggattagaaacattagctagaaggtcaactaacattacattaaga
gaagaaattaatcgtatagtggcagaaataaaagtaggttctactattgcagattcaatg
ctttcatcaaaatcaaagtttccaaagttacttggtgctatggtagctacaggtgaagct
acaggtaaattagatgaagtattaaaaagtatggcttcattttatgcaagtgaacacagg
gttaaacaaaagcttagaaatgctgcaacatatccattaatagttttgatttcttcattt
ataatgatttttatatttacaacatttatggtgcctaagatgattaattcaattacaaca
gtaggagcaactcttccacttataacaagaattgttatggggtttggtatgtttatgaag
aagttttggataatagtacttttagttattatattatttatctatcagtttaaaaaatat
ttaaaaacgtcagttggaagggctcataaagatagagttataaacaagatacctgtttta
ggaaaaggaataaattgtatggtagctacacgattttcaagagcattgtatctatttgta
tcaacaggatacccattagttcaagggcttgattatattatagatagtgtaaataacacc
atggcagagaagattttagcatcagctaaagatggaataacaagaggagaaggcttagca
gaaaatttagagagatatacgtattttgactctgtgttggtacagatgatagctataggg
gagcagacaggggaattagagaatataagtagacagatggcagaattttatgagtatgaa
tccgagatttatttaaataggatggcctcaatgatagagcctgttttaataattgcagtt
ggtattatagttgcgatactggttgtatcaatatttatgccaatgcttagtatatatgat
gccatgtag
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