Clostridioides difficile R20291: CDR20291_3349
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Entry
CDR20291_3349 CDS
T00998
Name
(GenBank) type IV pilus assembly protein
KO
K02652
type IV pilus assembly protein PilB
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cdl02044
]
CDR20291_3349
02035 Bacterial motility proteins [BR:
cdl02035
]
CDR20291_3349
Secretion system [BR:
cdl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CDR20291_3349
Bacterial motility proteins [BR:
cdl02035
]
Pilus system
Pilus assembly proteins
CDR20291_3349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_7
AAA_14
AAA_23
FtsK_SpoIIIE
Pox_A32
AAA_16
AAA
SRP54
AAA_11
nSTAND3
ResIII
ABC_tran
AAA_33
AAA_30
ATP_bind_1
DUF87
cobW
TrwB_AAD_bind
NB-ARC
DEAD
AAA_29
AAA_19
Zeta_toxin
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
CBE07366
UniProt:
A0A9R0CG56
LinkDB
All DBs
Position
complement(3984088..3985773)
Genome browser
AA seq
561 aa
AA seq
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MKPVAKKVRIGDKLVEKGYITEDQLKWALSEQKNSGKRLGEFLVQEGLIDSNLLISVLKE
LLDIESIFLEGTEIDTLATKMVPENICKRYTVFPFKIDGNKICLAMSDPQDREAVQDVRR
MSGKDVEIFISSTEDINKAIGHAYAHSEINKAMTEYNKNRTGGVRETVILEEDVNAAPIV
RLVNNILENAVRMEASDIHIEQSENYMRVRFRIDGMLREYMRMNSAPYKAVISRIKIMSD
INISEKRIPQDGRIYLKVDNKPIDFRVSTMPTNRDEKIAMRVLDKSNFMVSKEVLGIDEH
GSKIYDELINTPYGLILVVGPTGSGKTTTLYSMLNQLNTENRNLLTIEDPIEYELPGVNQ
SQINEKAGLTFASGLRAFMRQDPDIIMVGEIRDTETAEIAIRASLTGHLVLSTLHANTAV
GAISRLLDMDVESFLITSSVLGVISQRLTRKICEHCKVSYEADIGEKKALGIDVNESVTI
YRGKGCERCNNTGYKGRLGIFEMLEITPEIKELIDSSANQREILKMARKQGMVSLKEDIV
KKVLNGKTTVEEMIRIILMTD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctgtggctaaaaaagttagaataggagacaaactggtcgaaaaaggatatata
acagaagaccagcttaaatgggcactatcagaacaaaaaaacagtggaaaaagactagga
gaatttctagtacaagaagggcttatagatagtaacttactaataagtgtattaaaagaa
ctcttggatatagaaagtatatttttagaagggacagaaatagacactttagctacaaag
atggttccagaaaatatatgcaaaagatatactgtatttccatttaaaattgatggaaat
aaaatatgtctagccatgtcagacccacaagacagagaagcagttcaagatgtaaggcgt
atgtctggtaaagacgtagagatatttatatcaagtacagaagatataaacaaagcaata
ggtcatgcttatgcacattcagaaataaataaggcaatgactgagtacaacaaaaataga
actggtggagtaagagaaacagtaatacttgaagaagatgtaaatgctgctccaatagta
cgattagtaaataacatactagaaaatgctgttagaatggaagcaagtgatatacatata
gaacaaagtgaaaattacatgcgtgttaggtttaggatagatggaatgttaagagaatat
atgaggatgaactcagcaccatataaggcagtaatcagccgtatcaagataatgtcagat
ataaatatatctgaaaagagaataccacaggatggtagaatctatttaaaagtagataat
aaacccatagattttagggtttctacaatgccaactaacagggatgaaaagatagctatg
agggttcttgataagagtaattttatggttagtaaagaagtactaggaatagacgaacat
ggctctaagatatatgatgaattgataaacactccttatggtcttatattggttgttggt
cctactggaagtgggaaaaccactacattgtattcaatgttaaatcaactaaatacagaa
aatagaaatctattaacaatagaagaccctatagagtatgaattacctggtgtaaatcaa
tctcaaataaatgaaaaggcagggcttactttcgccagcggacttagagcttttatgcgt
caagacccagatataataatggttggagagataagagatactgagacagcagaaatagca
attagagcttctcttacaggacatttagttttaagtacattacatgcaaatacagcagtt
ggagcaatttcacgtcttttagatatggatgtggaaagttttttaataacttcatctgtt
ttaggtgtaatatctcaaagacttacacgaaaaatatgtgagcattgtaaggtttcatat
gaagcagatattggagaaaaaaaggctcttggtattgatgtaaatgaatcagtaactatt
tatagaggaaaaggttgtgaaaggtgtaataatactggatataaaggacgtctaggtata
tttgaaatgcttgaaattactccagaaataaaagagttaatagattcatctgcaaatcaa
agagaaattttaaagatggctagaaaacaaggcatggttagcttaaaagaggatatagtt
aaaaaggttttaaatggaaagacaacagtagaagaaatgattagaataattttgatgact
gattaa
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