Clostridioides difficile R20291: CDR20291_3361
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Entry
CDR20291_3361 CDS
T00998
Name
(GenBank) putative DNA-binding protein
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CDR20291_3361
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
CDR20291_3361
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
DarP
Motif
Other DBs
NCBI-ProteinID:
CBE07387
UniProt:
A0A9R0BNN2
LinkDB
All DBs
Position
complement(3998688..3999218)
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AA seq
176 aa
AA seq
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MIKEIIVVEGRDDVTAVKRAIDAELITTGGFGFPKGVMQRIKAANERRGVIIFTDPDFAG
EKIRKKIASEVPGCKHAFLPREEAKKDGDIGIENATPQSIIAALNKVRTENTEKRDEFKQ
VDLIRNGLIGNEEASLRRDALGKILGIGYGNAKQFLNRLNNYGVEREEFIDALKQI
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaataatagtagtagagggtagagatgacgttacagcagttaagagagca
atagatgcagaacttataactacaggtggatttggatttccaaaaggtgtaatgcagcgt
ataaaagctgctaatgaaagacgtggtgttataatatttacagacccagattttgcaggt
gaaaaaataagaaaaaaaatagcatcagaagttccaggatgtaaacatgcatttctacca
agagaggaagctaaaaaggatggagatataggtattgagaatgctactcctcaaagtata
atagcagctctgaataaagttagaactgaaaatacagaaaaaagagatgaatttaagcaa
gttgacttaattagaaatggtcttataggtaatgaagaagcatcacttagaagagatgca
cttggaaaaatacttggaattggatatggaaatgcaaaacaatttttaaatagattgaat
aattatggagttgaaagagaagaatttatagatgcattaaaacaaatctaa
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