Clostridioides difficile R20291: CDR20291_3459
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Entry
CDR20291_3459 CDS
T00998
Name
(GenBank) putative conjugative transposon replication initiation factor
KO
K07467
putative DNA relaxase
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CDR20291_3459
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GFIT
Motif
Pfam:
Rep_trans
Rol_Rep_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CBE07564
UniProt:
A0A9R0BP08
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All DBs
Position
4107080..4108201
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AA seq
373 aa
AA seq
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MAGISREHLSRIEAGKVALTEDMKHKLLEAVEKFNPDAPMFLLFDYVRIRFPTLDIQHVI
KDILKLNIDYMLHEDFGHYKYTEHYYIGDVFVYTSQDKEKGVLLELKGKGCRQFESYLLA
QERSWYDFLMDALVDGGVMKRIDLAINDRTGLLDIPELIEKCKNEECISKFRSFKNYGSG
ELVKHNEANKDGMGHTLYIGSFTSEVYFCVYEKNYEQSSKLGIPIEEVPIKNRFEIRLKN
EHAYYAIRELLTHYDAELTAFSIINQYIRFADKEANKRKSDWKTNARWSWFIGEGRPPVK
LTTKPEPYTLQRTLNWLQRQVAPTLKMLKQIDAGNQMDYLKTIEQQAKLTDKHKQIIRQQ
TASVDELIEKEKE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctggtatcagccgtgaacatctaagccgtatcgaagctgggaaggtagcactgacc
gaggatatgaagcacaaactactggaagcggtggaaaaattcaatcccgacgctcccatg
ttcctgctctttgattatgtgcgtatccgatttcccacgctggatatacagcacgttatc
aaggacattctaaagctgaatatagattatatgcttcacgaagatttcgggcattacaag
tacaccgagcattactatatcggggacgtgttcgtttacacttcacaagacaaggaaaaa
ggtgtcctgctggaactgaaaggaaaaggctgtcgtcagtttgaaagctatctgctggca
caggaaagaagctggtatgacttcctcatggacgcattagttgatggcggtgtgatgaag
cgtatcgacctagctatcaacgacagaacgggcttactggatattccagaactgatagag
aaatgcaagaacgaggaatgtatttctaaattccgtagcttcaagaactatggttctggg
gagctggtaaagcacaacgaagccaacaaggacggcatgggacatacgctttacattggt
tcatttaccagtgaagtgtacttctgtgtctatgaaaagaattatgaacaatcctcaaaa
ttagggataccgattgaggaagtccccattaaaaaccgatttgagatacgtttgaaaaat
gagcacgcctactatgccattagagagctgctgacccactacgacgcagagctgacggca
ttttctattatcaaccagtatatccgctttgccgataaggaagccaacaagcgaaaaagc
gactggaaaaccaacgcccgctggtcttggttcattggcgagggacgaccgcccgtgaag
ctgacgacaaagccagagccttacactctgcaaaggacgctgaactggttacaaagacag
gttgcaccgaccttgaaaatgctgaaacagatagacgctggcaatcagatggactatctc
aagaccattgaacagcaggcaaagctgacagataagcacaagcagataatcagacagcag
acggcttcggtggacgaactgatagaaaaagaaaaggagtga
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