Clostridioides difficile R20291: CDR20291_3501
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Entry
CDR20291_3501 CDS
T00998
Name
(GenBank) putative selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00450
Selenocompound metabolism
cdl00970
Aminoacyl-tRNA biosynthesis
cdl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CDR20291_3501
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDR20291_3501
Enzymes [BR:
cdl01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CDR20291_3501
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CBE07640
UniProt:
A0A9R0BNZ6
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Position
complement(4152258..4153367)
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AA seq
369 aa
AA seq
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MSSIFEKYSVRRVINASGKMTILGVSTVDKEVIEAIGEGCKNFLIIEELVNKTGEYIANL
LGCESALIVSSASAGIAQSVGAMIAKDDMSLVYNVNNPKKQVKREIIIPKGHNVDYGVPV
EVMIRLGGGEVVEAGYANMCNKEHIIREINENTAAIMYIKSHHCVQKSMLSVLDAVQVAK
EYNLPLIVDAAAEEDLNVYYELGADLVIYSGAKAIEGPSSGLVIGKKKYIDNVKLQSKGI
GRAMKIGKENIVGLTCAIERYISNDKVTLKEMEDKLNPFIDKINTIKGVSASITRDSAGR
EILRGEINFNEDIINKSTQQIINELRSGEIAIYTRDYKANEGKIEIDIRSVTGSDLDNIY
NRIKNIVES
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtatatttgaaaaatactctgtaagacgtgttataaatgcttcaggcaaaatg
actatactaggagtatcaacagtagataaggaagttattgaagcaataggtgaagggtgt
aaaaatttccttataatagaagaacttgtaaataaaacaggtgaatatatagcaaattta
ttagggtgtgaaagtgcactaatagtttctagtgcatctgctgggattgcacagagtgtg
ggagcaatgatagcaaaagatgatatgagtctagtttacaatgtaaataatcctaagaaa
caagttaaaagggaaataataattccaaaggggcataatgttgattatggagttccagta
gaagtaatgataagacttggaggaggagaagttgttgaggccggctatgctaatatgtgt
aacaaggaacatataataagagagataaatgaaaatacagcagcaattatgtatattaaa
tctcatcattgtgttcaaaagagtatgctaagtgtattagatgcagtacaagttgctaaa
gaatataatttacctttgatagtagatgcagcagcagaagaagatttaaatgtatattat
gaattgggagcagacctagtgatatacagtggtgctaaggctatagaaggtcctagctcg
gggttagtaataggtaagaaaaaatacatagataatgtaaagcttcaatcaaagggtata
ggaagagctatgaaaataggaaaagaaaatattgtaggtctaacatgtgcaattgagaga
tatataagtaatgataaagtaactttaaaagaaatggaggacaagctaaatccatttata
gacaagataaatactataaagggagtgagtgctagtataactagagattcagcaggtaga
gaaatacttcgtggagaaattaactttaatgaagatataataaataagtcaacacaacaa
attataaatgaacttagaagtggagagatagctatatacactagagactataaggctaat
gaaggcaagattgagattgatataagaagtgtaactggaagtgatttagataatatttat
aataggataaaaaatatagtagaaagttag
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