Clostridioides difficile R20291: CDR20291_3530
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Entry
CDR20291_3530 CDS
T00998
Name
(GenBank) putative selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00450
Selenocompound metabolism
cdl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CDR20291_3530
Enzymes [BR:
cdl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CDR20291_3530
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CDR20291_3530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
SHMT
Transketolase_C
KYNU_C
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
CBE07689
UniProt:
A0A9R0BNX7
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All DBs
Position
complement(4180401..4181543)
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AA seq
380 aa
AA seq
DB search
MIYLDNAATTYPKPERVYNAVLDCMKNYCANPGRAGHKLAMRAAREIYDTRENIAKLFNV
SNPMNIVFTSNATDSLNLAIKGVLQEGDHVITTSMEHNSVIRPIKALEKRGIENTVVKCD
YEGFLDYEDLEKSIKSNTKLIVTTHASNVCGTLIDIKKVGEIAKKHNILFLVDASQTAGV
YDIDVNECNIDMLAMPGHKCLFGPQGTGILYVREGLNLNILKEGGTGSKSEEIVQPELFP
DKYESGTHNTPGIAGLNQGILFIFERGINNIRQHEEELCQYMIDKLEEVSDIKIYGPKDS
KKRASVIALNIGDMDSGEVTFLLDSDYNIATRSGIHCSPLAHTTLGTLKQGAVRFSIGYF
NTKDEIDKAVEALKKISKNK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttagataatgctgcaactacatatccaaaaccagaaagagtgtataatgct
gttttagattgtatgaaaaattattgtgcaaatccaggtagagcaggccataaacttgct
atgagagctgctagggagatatatgatacaagagagaatatagctaagttgttcaatgta
agtaatcctatgaatatagtatttacatctaatgcaacagattctttaaatttagcgata
aaaggtgtattacaagaaggagaccatgtaataacaacgtctatggagcataattcagta
ataagacctataaaagcattggaaaaaaggggtattgaaaatactgtagtaaaatgcgat
tatgagggatttttagattatgaagatttagaaaaatcaataaagagtaatactaaactg
attgtaacaacacacgcatctaatgtatgtggaactttaatagatataaaaaaagttgga
gaaatagctaaaaaacataatatactatttttagtagatgcatcacaaacagcaggtgtt
tatgatatagacgtaaatgaatgtaatatagatatgttggcaatgccaggtcataaatgc
ttatttgggcctcaaggaacaggtatattatatgtaagagaagggttgaacttaaatata
ttaaaagaaggtggaacaggtagtaaatcagaagaaatagttcaaccagagttattccca
gataagtatgaatcaggaactcataatactccaggtatagcaggtcttaaccaaggtata
ctatttatatttgaaagaggaatcaacaatataagacaacatgaagaagaattatgtcaa
tatatgatagacaaactagaggaagtatcagatataaagatatatggaccaaaggatagt
aaaaaaagagcatcagtaatcgctctaaatataggagatatggattctggagaggttact
ttcttattagatagtgattataatatagcaactagatcaggaatacattgttcaccacta
gcacataccactttaggtactttaaaacaaggtgcagtaaggttcagtataggatatttc
aacacaaaagatgagatagataaagcagtggaagctttgaaaaaaatttcaaaaaataaa
tag
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