Clostridioides difficile R20291: CDR20291_3552
Help
Entry
CDR20291_3552 CDS
T00998
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
cdl
Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdl03021
]
CDR20291_3552 (sigB)
Transcription machinery [BR:
cdl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDR20291_3552 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_10
HTH_3
KORA
Phage_terminase
GerE
HTH_23
LacI
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
CBE01463
UniProt:
A0A9R0BHD1
LinkDB
All DBs
Position
9857..10630
Genome browser
AA seq
257 aa
AA seq
DB search
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIY
QVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISD
AKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLI
DKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRFFFDKTQSSIAKELGISQMTVSR
LEKKVVEKLKKEYEKNL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtagctaatgctacacattacctaaatatggatacaaaagagctatttaat
ttatataataaaaataaaaatgtagacattagaaatattcttattgaaagacatctgtat
ttagcaagattgttagctaagaagtatataaacaaaggtgttgattttgaagatatatat
caagttgcttcattggcattaatttatgctattgatagatatgatgttgagaaaggattt
gagttctccagctttgcgacaccaactatagtaggagaaataaaaaagtattttagagat
aaggtatggacacttagagtcccaagaagaatacaggaattaagcaaaaagataagtgat
gcgaagattaaattagaacaagaaaataagaagcatccaaaggtaaaagatatagctgat
tatataggcgttagtgaagaagatgttttagaggctatggaggcttcttatggatatcaa
ccaatgtctttggattcatcaagtaatgatgattcagaggataaagatataactcttatt
gataagattggaaaagaagaaggtaactttggaagtatagagtatgaagattttattaat
aagtttattgaaactttaaatgaattagaagttaaaatttttaaagatagatttttcttt
gataaaacacaatctagtatagctaaagaactagggatatcacagatgactgtttctaga
ctagagaaaaaggtagtagagaagctgaaaaaagaatatgaaaaaaatttataa
DBGET
integrated database retrieval system
