Cronobacter dublinensis: AFK67_00260
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Entry
AFK67_00260 CDS
T04061
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdm03016
]
AFK67_00260 (trmE)
Transfer RNA biogenesis [BR:
cdm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AFK67_00260 (trmE)
Prokaryotic type
Methyltransferases
AFK67_00260 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ALB65007
LinkDB
All DBs
Position
complement(46923..48287)
Genome browser
AA seq
454 aa
AA seq
DB search
MSHNDTIVAQATPPGRGGVGILRVSGQQARDVAQAVLGKLPKARYADYLPFKDADGTALD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIFVEAAIDFPDEE
IDFLSDGKIEAQLNEVIGDLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDATDPAQIWPDFIARLPAKLPITVVRNKADVTGEQPGISEVNGHSLIRLSAR
TNEGVDVLRNHLKQSMGFDTSMEGGFLARRRHLQALETAANHLQQGKAQLLGAWAGELLA
EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacaccattgtcgcccaggcgacgcctcccggacgcggcggcgtaggc
attctgcgcgtctccggccagcaggcgcgggacgtggcgcaggcggtgctgggcaaactg
ccgaaagcgcgctatgccgattatctgccgtttaaagatgccgacggcacggcgctcgat
caggggatcgcgctgtggttcccgggccccaactcctttaccggcgaagacgtgctggaa
ttgcagggccacggcggcccggtgattctggatctgctgttaaagcgcatcctcaccctg
cctggcgtgcgtatcgcaaggcctggcgaattctccgagcgggcgtttcttaacgacaag
ctcgatctcgcgcaggcggaagccatcgccgatctgattgacgccagctctgaacaggcg
gcgcgctcggcgctgaactcgctacagggcgcgttctccgcgcgcgtgaaccatctggtc
gaggcgctgacgcacctgcgcatttttgtcgaagcggctatcgatttccccgatgaagag
atcgactttctctccgacggcaaaatcgaggcgcagcttaacgaggtcatcggcgatctc
gacgcggtacgcgccgaagcgcgtcagggcagcctgctgcgcgaagggatgaaagtggtg
attgccggtcgtccaaacgcgggcaaatcgagcctgctgaacgcgctggcgggccgcgag
gcggcaattgtgacggatatcgcgggcacgacccgtgacgtgctgcgcgagcatattcac
atcgacggcatgccgttgcatatcatcgacaccgccggtctgcgcgaggcgagcgatgaa
gtggaacgcatcggcattgagcgcgcctggcaggaaatcgaacaggccgaccgcgtactg
tttatggttgacggcaccacgaccgacgccaccgacccggcgcaaatctggcccgatttt
atcgcccgtctgcccgcgaaactgccgatcaccgtggtgcgtaataaagcagacgttacc
ggcgagcagccaggcataagcgaagtgaatggtcactcacttatccgcctttcggcgcgc
acgaatgagggcgtggacgtgctgcgcaaccacctgaagcaaagcatggggtttgatacc
agcatggaaggcggcttcctggcccgccgacgccatctgcaggcgctggaaacggcggcc
aaccacttacaacagggcaaagcgcagctgctgggcgcctgggctggcgaactgctggcc
gaagagctgcgtctggcgcagcaggcgttaagcgagataaccggtgaattcacctccgac
gatctgctgggccgtattttctcaagcttctgcatcggtaaataa
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