Cronobacter dublinensis: AFK67_00665
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Entry
AFK67_00665 CDS
T04061
Name
(GenBank) type IV secretion protein Rhs
Organism
cdm
Cronobacter dublinensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
PAAR_motif
prePAAR_I
TP_0579
Tox-ART-HYD1
GtfB_M
Motif
Other DBs
NCBI-ProteinID:
ALB65083
LinkDB
All DBs
Position
138332..142894
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AA seq
1520 aa
AA seq
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MSEPLAARYQDPLIHSSLLADVVSGAVEGAICLAALTAGMAMMTTGLGTFAGVALIAVVF
GSGVAEDAGDLVGQGVDAVLDFFGWRGPPDAIITSGSHNVHIMDLPAARAAGTVDHDYLN
TPIPEESFPDKAKAFAINTAVTILEVAQFTLHPLDNLAAGANAIASSGWQGVKNFAGSVW
DNLTQPVVAGASPFAKEAPLDTVECTKGHTVTGGNFLAEGSKKVLINGQPACRDGDRSTC
EAKIKVKENTRVRIGGESIVVRDIRSGKNFWARLIGNAIGSLGPGIIRNLSAGLLKTIFS
RQILKAFCCQLAADLAMGLTTLGLIQAGKVGSEARHTQHPVDIASGAKILAGGEDRDFTL
EDRIPLIWQRIYNSRNLATGMLGTGWLLPFETRFFRLEDNTFIWRDMSGRDLGFGELNPG
DVVDYLEDGITLYYTVTGTLMLQMANGEYHVYEPDPTNPGEWRLFRIYDRHENCQYYNWD
EHGRLVRISSDNEALDVELAYETAHGRLASVHQVCAGERRLLVTYGYNEHGQLTDVTDAD
GIVTRRFGWDRASDMMGWHSYSTNLSVHYQWQPAADAPNWRVCSYQVLDDQDNVLERWRI
DADEAKRCATVSCDAGFSTRHCWDFLYRITEFTDRNGGVWRYEWADYAELLKAATTPDGS
RWEYGYDEHGNLTQVRDPLGNSTFTTWHPVFAFPLKEVLPDGGTWQYEYNARGDVVSLTD
PKGGVTRFEWNEQGDLVKQTDALENTHRFWWNERGLLVRDEDCSGNQSHRLYDAAGRPLS
AGDAEGNTDRWTLSAAGRLQTWRRADGRETHYEYDSAGLLCGQDDDGLRERKVTRNARGQ
VVSAADPAGHLTHLRYDRLGRLTTLVNPNRESWRFEYDATGRLTGQRDYAGRLTEYRHDA
LGQVTEVIRHPLPGSGEAPLVTAFEYDVLGRLTARETADHRTEYRHDTLSLEIRRATRAE
WRTALLEEREPEWDAVLVFTRNAAGELVSEENHGGKFEYEYDALGNLSSTRFPDGRELAS
LRYGTGHLLEMQLRHGGATHTLAAYGRDRLHRETSRSQGVLSQETHYDTAGRVTQRTVLD
ARRELVFERRYRWDRTDQIVQQIHTDATPATPGEKYSQYLWGYDAAGQVTKAVEPQKEER
FFWDAAGNRTEEHRNPVWHNLLLRLDGLKLDYDGFGRLTRRQDKNGVVQHFAYDDEQRVK
EIRFEGNSEFRKVEYRYDPLGRRTHKILWRYNDPQPETIRFDWQGLQLAGEQSDKEPDHY
VQYVYTEGSYEPLARIDSVFDDCEIYWYHTELNGLPERVTDADGQTVWRGQFSTWGKTER
ELSVPQWQVPQNLRFQGQYLDRESGLHYNLFRYYDPVAGRYTQMDPIGLAGGINTYSYVG
DPLTWVDPWGLAGNDIFIHYTDKFGFDRIMETGVIEANSKGKVYITDILMSPEDAMRDIF
INDPIHTGRGDYAIIFKADAEQMSKISQSAELEYIHSGRLKIGEIVHAGKNPYATLTHLS
YEQRLGMTQEQMKSRGVRCG
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaccgttagctgcccgttaccaggacccgctcatccacagctctctgctcgcc
gatgttgtcagcggtgcggtcgaaggggccatctgtcttgccgccttaacggcgggtatg
gcgatgatgacgaccgggcttggcacgttcgcgggcgttgcattgattgccgttgtcttc
ggcagtggcgtcgcggaagacgcaggcgatctggtcggccagggtgtcgatgccgtgctg
gatttcttcggctggcgtggaccgccggatgccattatcacgagtggctcgcacaacgtt
catatcatggatctccctgccgcccgtgcggcgggcacggtcgatcatgattatctcaat
acgcctatcccggaagagagctttcccgataaggcgaaagcgttcgcgataaacacggcg
gtgaccattctcgaagtggcgcagtttacgctgcacccgcttgataatctggcggcgggc
gccaacgcgattgccagcagcggctggcagggcgtgaaaaattttgcgggcagcgtctgg
gataacttaacccagccggtcgtggcgggggccagcccttttgctaaagaagcgccgctg
gataccgttgagtgtaccaaaggccatacggtcaccggcggtaacttcctggcggaaggc
tcgaaaaaagtgctgatcaacggtcagcccgcgtgccgtgacggcgatcgcagcacctgc
gaagcaaagataaaagttaaagagaacacgcgcgtgcgcatcggcggcgagagcattgtg
gtgcgcgatatccgcagcggtaaaaatttctgggcgcggcttattggtaacgccatcggc
agcctcgggccgggaattattcgcaacctcagcgcaggcttactgaagacgattttcagc
cgccagatactcaaagcgttttgctgtcagctcgccgccgatctcgcgatgggattaacc
acgctcgggctgatccaggccgggaaagtcggcagtgaagcgcgccatacgcagcaccct
gtcgatatcgccagcggcgcgaaaatcctcgcgggcggcgaagaccgtgatttcacgctg
gaagaccgtattccgctcatctggcagcgcatctacaacagccgtaatctcgcgaccggt
atgctcggcactggctggctgctgccgtttgagacccgcttcttccgccttgaggacaat
acgtttatctggcgcgacatgtcgggccgcgacctgggctttggcgagctgaaccccggc
gacgtggtggattatctcgaagacggtatcacgctctattacaccgtgaccggcacgctg
atgctccagatggcgaacggcgaataccatgtctacgagccagacccgacgaaccccggc
gaatggcgactgtttcgcatctacgatcgtcacgagaactgccagtactacaactgggac
gagcacggcaggctggtgcggatttccagcgacaacgaggcgctggatgtcgagcttgcc
tatgagaccgcgcatggccgtctcgccagcgtgcatcaggtttgcgcgggcgagcgccgc
ctgctggtgacttacggctataacgaacacggccagctaaccgacgtgaccgacgccgac
ggcatcgtcacgcgccgcttcggctgggaccgcgccagcgacatgatgggctggcacagc
tactccactaacctcagcgtgcattatcagtggcagcccgccgccgatgcgcccaactgg
cgcgtgtgcagttatcaggtgctggatgaccaggataacgtgctggagcgctggcgcatc
gacgccgacgaggcgaaacgctgcgcgacggtgagctgcgacgcgggcttctcaacgcgc
cactgctgggatttcctctaccgcatcaccgagttcaccgaccgcaacggcggcgtgtgg
cgctacgagtgggcggactacgccgaactgctgaaggcggccaccacgccggacggcagc
cgctgggaatacggctacgacgagcacggcaacctgacgcaagtgcgcgacccgctcggc
aacagcacgttcaccacctggcacccggttttcgcgttcccgctgaaggaggtgctgccg
gacggcggcacctggcagtatgagtacaacgcgcgcggcgacgtggtctcgctcaccgac
cccaaaggcggcgtgacgcgctttgagtggaacgagcagggcgacctcgttaagcagacg
gacgcgctggagaacacgcaccgtttctggtggaacgagcgcgggctgctggtgcgcgac
gaggactgctcgggcaaccagagccaccggctgtacgacgcggcgggacgaccgctgagc
gcgggcgacgccgaaggcaacaccgaccgctggacgctgagcgcggcggggcgtctgcag
acctggcggcgggcggacggccgcgagacgcactacgaatatgacagcgccgggctgctg
tgcgggcaggacgacgacgggctgcgcgagcgcaaagtcacgcgcaacgcgcgcgggcag
gtggtgagcgccgccgacccggcgggccatctcacgcacctgcgctatgaccgcctgggc
cgcctgacgacgctggtgaacccgaaccgcgaaagctggcgctttgagtatgacgccacg
ggccggctgacgggccagcgggattacgcgggccgcctgacggagtaccgccacgacgcg
ctgggccaggtgacggaggtgattcgccatccgctgccgggcagcggggaggcgccgctg
gtcaccgcgtttgaatatgacgtgctggggcgcctgacggcgcgggaaaccgccgaccac
cgcaccgagtaccgtcacgacacgctgtcgctggaaatccgccgcgccacccgcgccgag
tggcggacagcgctgctggaagagcgcgaacccgagtgggacgccgtactggtcttcacc
cgcaatgccgcaggcgagctggtgagcgaggagaaccacggcgggaaatttgagtacgag
tacgacgcgctcggcaacctcagcagcacgcggttcccggacggtcgcgagctggcaagc
ctgcgatacggcaccggtcacctgctggagatgcagctgcgccacggcggggcgacgcac
acgctggcagcttacggtcgcgaccgcctgcaccgtgaaacgtcccgcagccagggcgtg
ctctcgcaggaaacccattacgacaccgcggggcgcgtcacccagcgcacggtgctggac
gcgcgacgcgaactggtgttcgaacgccgctatcgctgggaccgcaccgaccagatagtc
cagcagatacacaccgacgcgacgcccgcgacgccgggcgagaagtacagccagtacctg
tggggctacgacgcggccggtcaggtcacaaaagccgtcgagccgcagaaggaagagcgc
ttcttctgggacgccgcaggcaaccgcacggaggaacaccgcaacccggtgtggcacaac
ctgctgctgcgtctcgacgggctgaagctcgattacgacgggttcgggcggctcacgcgg
cgtcaggataaaaacggcgtggtgcagcattttgcctatgatgatgagcagcgggtaaaa
gaaatacgctttgaggggaacagcgagttccgcaaagtggaataccgctacgacccgctg
gggcgcaggacgcacaagattctgtggcgctataacgacccgcagccggaaaccatccgc
ttcgactggcagggactgcaactggcgggcgagcagagcgacaaggaacccgaccactac
gttcagtatgtctatacagagggcagttacgagccgcttgcgcgcatcgacagcgtcttc
gacgactgcgaaatttactggtaccacaccgaactcaacggcctgccggagcgggtgacg
gacgccgacggccagaccgtctggcgcggacagttcagtacgtggggcaaaacggagcgc
gaactcagcgtgccgcagtggcaggtgccgcagaacttacgcttccagggccagtatctc
gaccgcgaaagcgggctccactacaacctgttccgctactacgacccggtcgctggtcgt
tacacccagatggacccgattgggttagcgggcgggataaatacctacagctatgtgggt
gatccgctgacgtgggtggatccgtgggggttggcaggtaatgatatatttattcattat
actgataaattcggctttgatcgtataatggaaacaggtgtgattgaagcaaactctaaa
gggaaagtttatattactgacatattgatgtctccagaagatgcaatgagggacatattt
attaacgatcctattcatactgggcgtggcgattatgccattatttttaaagccgatgca
gaacaaatgagtaaaatcagccaaagtgccgaattggagtatatccattctggtaggcta
aaaatcggcgagattgtacatgctggtaaaaacccgtatgcaacattgactcacttatca
tatgagcagagactaggtatgacgcaagagcaaatgaaatcgagaggagtaaggtgtggc
tga
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