Cronobacter dublinensis: AFK67_01235
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Entry
AFK67_01235 CDS
T04061
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cdm
Cronobacter dublinensis
Pathway
cdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK67_01235 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdm03021
]
AFK67_01235 (rho)
03019 Messenger RNA biogenesis [BR:
cdm03019
]
AFK67_01235 (rho)
Transcription machinery [BR:
cdm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AFK67_01235 (rho)
Messenger RNA biogenesis [BR:
cdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AFK67_01235 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ALB65179
LinkDB
All DBs
Position
268171..269430
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atgggcctggaaaacctggcccgcatgcgcaaacaggatattattttcgccatcctgaag
cagcacgcgaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaggat
ggcttcggcttcctccgttctgcagacagctcctacctcgccggtcccgacgatatctac
gtttctcccagccaaatccgccgtttcaacctccgtacaggggataccatctccggtaag
attcgtccgccgaaagaaggcgagcgctacttcgcgctgttgaaagtgaacgaagttaac
ttcgataaaccggaaaacgcacgtaataagatcctgttcgaaaacttgacgccgctgcac
gcgaactcgcgtctgcgtatggagcgcggcaacgggtcgactgaagatttgaccgctcgc
gtactggatctggcgtcgccgattggtcgcggtcagcgtggtcttatcgtggcgccgccg
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcattgcatacaaccacccg
gattgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagtggtcgcgtccacgtttgacgaaccggcttcccgccacgtt
caggttgctgaaatggttatcgagaaagccaagcgcctcgtcgagcacaaaaaagacgtt
atcattctgctcgactccatcacccgtctggcacgcgcttacaacaccgtcgtgccggca
tccggcaaagtgctgaccggtggtgtggacgctaatgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggtagcctgaccattattgcgactgctctg
attgataccggctctaaaatggatgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcatctctctcgtaagatcgcggaaaaacgcgtcttcccggctatcgattac
aaccgttccggtacccgtaaagaagagctgctgacgactcaggaagaactgcagaaaatg
tggatcctgcgtaaaatcattcacccgatgggtgagatcgacgcgatggaattcctcatt
aataaactggcgatgaccaaaacgaacgacgaattcttcgatatgatgaaacgttcgtag
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