Cronobacter dublinensis: AFK67_01360
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Entry
AFK67_01360 CDS
T04061
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm00300
Lysine biosynthesis
cdm00470
D-Amino acid metabolism
cdm01100
Metabolic pathways
cdm01110
Biosynthesis of secondary metabolites
cdm01120
Microbial metabolism in diverse environments
cdm01230
Biosynthesis of amino acids
Module
cdm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AFK67_01360 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AFK67_01360 (dapF)
Enzymes [BR:
cdm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AFK67_01360 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALB65200
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Position
293156..293980
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AA seq
274 aa
AA seq
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MQFAKMHGLGNDFMVVDAVTQNVFFSPEMIRRLADRHHGVGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMILTVNEDELVRVNMGE
PVFEPSLVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVSTAPVETLGPLME
SHERFPERANIGFMQVMNPEHIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAAQVRV
DLPGGRLDIAWKGPGNPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgctaagatgcatggcctgggtaacgactttatggtcgtggacgcggtgacg
caaaacgtctttttttcccctgagatgatccgccgtctggcggacagacatcatggggtg
gggttcgatcaactactgatcgtcgagccgccttacgatcctgaccttgattttcactat
cgcattttcaacgccgacggcagcgaagtagcccagtgcggcaacggcgcgcgctgcttc
gcgcggtttgtacgcctgaaagggctcactaacaaacgcgatatccgcgtcagtacggcg
aacgggcggatgattttaaccgtcaatgaagacgaactggtgcgcgtgaacatgggcgaa
ccggtgtttgagccctcgctggtgccgtttcgcgccaataaggccgagaagacgtacatc
atgcgcgccgccgagcagaccgtgctgtgcggcgtggtctcaatgggcaacccccactgc
gtgattcaggtcgatgatgtcagcaccgcgccggtggagacgctcggcccgctgatggaa
agccacgagcgcttcccggagcgcgccaacatcggttttatgcaggtgatgaacccggaa
catatccggctgcgcgtcttcgagcgcggcgccggcgaaacccaggcctgcggcagcggc
gcatgcgccgcggtcgcggtcggcattcagcagggtctgctggcagcccaggtgcgcgtt
gatttacccggcggtcggctggatatcgcctggaaagggccaggcaatccgctctttatg
accggccccgccacccacgtttatgatggatttattcacttatga
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