Cronobacter dublinensis: AFK67_01705
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Entry
AFK67_01705 CDS
T04061
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm00730
Thiamine metabolism
cdm01100
Metabolic pathways
cdm01240
Biosynthesis of cofactors
Module
cdm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AFK67_01705
Enzymes [BR:
cdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AFK67_01705
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALB65260
LinkDB
All DBs
Position
complement(363725..365626)
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AA seq
633 aa
AA seq
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MSVSNKPGRREQRAAAQRFIDTLEGTAFPNSHRIYLTGSREDIRVPMREIRLSPTLTGGT
KENPHVEPNEPVPVYDTSGPYGDPAVRIDVREGLEKLRSRWIDARNDTETLSARSSAYTR
ERLADDGLDDLRFHGLLTPKRAQPGKRVTQLHYARQGIVTPEMEFIAIRENMGRERIRSG
VLRQQHPGVGFGARLPDNITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQA
LEKANGIAEDLSWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIM
AKWCLSHHKENFLYEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGEL
TKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSG
IGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNA
MSKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRD
YAAQQAIDAGMADMSTHFRARGGDIYLRQEEVE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatcaaacaaaccaggccgccgcgaacagcgcgccgccgcacaacgcttcatc
gacacgctggaaggcaccgctttccccaattcgcaccgcatctacctcaccggctcgcgc
gaagatattcgcgtgccgatgcgtgaaatccgcctgagtccaacgcttacgggcggcacg
aaagaaaacccgcacgttgaacccaacgagccggtgccggtttatgacacctctggtccc
tatggcgatccggccgtgcgcatcgacgtacgcgaagggctggaaaagctgcgcagccgc
tggatagacgcccgcaacgacaccgaaactctgagcgcgcgcagctccgcctatacccgt
gagcgtctcgctgacgacgggctcgacgatctgcgttttcacggtctgctgacgccgaag
cgcgcgcagccgggtaaacgcgtcacgcagctgcactacgcccgccagggcatcgtaacg
ccggaaatggagttcatcgccattcgcgaaaacatggggcgcgagcgcattcgctccggg
gtactgcgccagcagcatccgggcgttggtttcggcgcgcgtctgccggataacatcacg
ccggaatttgtgcgtgacgaagtggccgccgggcgcgccattatccctgctaacatcaac
cacccggaatcggagccgatgattatcggccgcaactttctggtgaaggtgaatgcgaat
atcggcaattcggcggtgacgtcgtcgattgaagaagaggttgagaagctggtctgggcc
acccgctggggcgccgatacggtcatggacctctccaccgggcgctatattcacgaaacc
cgcgaatggatcctgcgcaacagcccggtgccgatcggcaccgtcccgatctatcaggcg
ctggagaaggccaacgggatcgccgaagatctcagctgggagatgttccgcgacacgctg
ctggagcaggccgaacagggcgtcgattacttcaccattcacgctggcgtgctgctgcgc
tacgtaccgatgaccgcgaaacgcctgacgggtatcgtctcgcgcggcggctcgatcatg
gcgaaatggtgcctttcgcaccataaagaaaactttctctacgaacacttccgcgaaatc
tgcgaaatttgcgccgcctatgatgtgtcgctatcgctcggcgacgggctgcgcccgggc
tctatccaggacgccaacgacgaggcgcagttcgccgaactccacacgctcggcgaactg
acgaaaatcgcctgggaatatgacgtgcaggtgatgattgaaggccccggccacgtgccg
atgcagatgatccgccgcaacatgactgaagagcttgagcactgccatgaagcgcccttc
tacaccctcgggccgcttaccaccgacatcgcgccgggctacgatcacttcacgtcgggc
atcggcgcggcgatgataggctggttcggctgcgccatgctctgctacgtgacgccaaaa
gagcacctcggcctgccgaacaaagaagatgtgaagcaggggctgatcacctataaaatc
gccgcccatgccgccgacctggcgaaagggcatccgggcgcgcagatccgcgacaacgcg
atgtcgaaagcacgcttcgaattccgctgggaagatcagttcaacctggcgcttgatcct
ttcaccgcccgcgcgtatcacgacgagacgctgccgcaggaatccggcaaagtggcgcac
ttctgctctatgtgcggtccgaaattctgctcgatgaaaatcacgcaggaggtgcgtgat
tacgccgcgcagcaggccatcgatgccgggatggcggatatgtctacccactttcgcgcc
cgcggcggcgacatctatctgcgtcaggaggaagtggaatga
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