Cronobacter dublinensis: AFK67_02285
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Entry
AFK67_02285 CDS
T04061
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdm03016
]
AFK67_02285 (truB)
Enzymes [BR:
cdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFK67_02285 (truB)
Transfer RNA biogenesis [BR:
cdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFK67_02285 (truB)
Prokaryotic type
AFK67_02285 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALB65360
LinkDB
All DBs
Position
483242..484186
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGTVVEERPVAFSEQALQDALESFRGDTL
QVPTMFSALKYQGKPLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEQLNALLEAAQQQDIAPSELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSDAPAQGLVRVTEGDAQKFLGMGEIDSE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcatggcgtgttgctgctggataagccg
caggggctctcctccaacgacgcattgcaaaaggtaaagcgcctctataatgctaatcgt
gctggtcatacgggcgcgctggacccgctggcgaccggcatgctgccgatttgcctcggc
gaagcgaccaagttttcccagtatctgctcgattccgataagcgttatcgggtgattgcg
cgcctcggacaacgcaccgacacttctgatgccgacggcaccgtggtggaagagcgtccg
gtcgcgtttagcgagcaggcgctgcaggacgcgctagagagctttcgtggcgatacgctg
caggtgccgaccatgttttcggcgctgaaataccagggcaaaccgctgtacgaatatgcg
cgtcagggtatcgaagtgccgcgtgaagcgcgtccgattaccgtttacgaactgctgttt
attcgccatgaaggcaatgagcttgagcttgaagtgcactgctcgaagggtacgtacatt
cgcaccattattgatgacttaggcgaaaagctcggctgcggcgcgcatgtgacttacctg
cgccgtctgacggtcagtaaatatccggtggatcgtatggtgaccctcgagcagctaaac
gcgctgctcgaagcggcgcagcagcaggatatcgcgccgtctgaactgctcgacccgctg
ttgatgccaatggacagtcctgcttcggactacccagtcgtcaaccttccgctgacctcc
tccgtttattttaaaaacggcaaccccgtgcgtaccagcgatgcgcctgcgcagggcctg
gttcgcgtgacggaaggcgacgcgcagaagtttctcggcatgggtgaaatcgacagtgaa
ggccgcgtagcgccccgccgtctggtggtggagtatccggcgtaa
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