Cronobacter dublinensis: AFK67_03415
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Entry
AFK67_03415 CDS
T04061
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm00220
Arginine biosynthesis
cdm00240
Pyrimidine metabolism
cdm00250
Alanine, aspartate and glutamate metabolism
cdm01100
Metabolic pathways
cdm01110
Biosynthesis of secondary metabolites
cdm01240
Biosynthesis of cofactors
Module
cdm_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AFK67_03415 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AFK67_03415 (carB)
00220 Arginine biosynthesis
AFK67_03415 (carB)
Enzymes [BR:
cdm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AFK67_03415 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
ALB65570
LinkDB
All DBs
Position
737844..741068
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMDEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEQVAEQG
INGLDADFLRMLKRKGFADARLAKLAGVSESEIRKLREQYNLHPVYKRVDTCAAEFATDT
AYMYSTYEDECEANPNQDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEKVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLSEQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVREGDKERVVDL
AAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADAKEKVISVQEMHAQITK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacattaaaagcatcctgatccttggcgcaggcccgattgttatc
ggccaggcgtgcgaattcgactactccggcgcgcaggcgtgtaaagcgctgcgtgaagag
ggctaccgcgttatcctggtgaactccaacccggcaaccatcatgaccgacccggagatg
gccgacgcgacgtacatcgagcccatccactgggaagttgtgcgcaaaatcatcgaaaaa
gagcgcccggacgcggtgctgccgacgatgggcggccagacggcgctgaactgcgcgctg
gagctggagcgtcagggcgtgctggaagagtttggcgtgaccatgattggcgcgactgcc
gacgcgattgataaagccgaagaccgccgccgttttgacgtggcgatgaagaaaatcggt
ctggaaaccgcgcgctccggcatcgcccatacgatggacgaagcgctggcggtcgcggca
gatgtcggttacccgtgcatcattcgtccgtcctttacgatgggcggcaccggcggcggc
atcgcgtataaccgcgaagagttcgaagagatctgcgcccgcggcctcgacctttccccg
accaaagagctgctgattgacgagtcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtctgctctatcgaaaacttcgacgcgatg
ggtatccataccggcgactccatcaccgtggccccggcccagacgctgaccgacaaggaa
taccagatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggcgtcgaaaccggc
ggttccaacgtgcagtttgcggtgaacccgaaaaatggccgcctgattgttatcgagatg
aacccgcgcgtgtcgcgctcctcggcgctggcgtccaaagcgaccggtttcccgattgcc
aaaattgcggcaaaactggcggtgggttacaccctcgacgagctgatgaacgacatcacc
ggcggccgcacgccagcatcgttcgagccgtccatcgactatgtcgtcaccaaaatcccg
cgctttaactttgaaaaattcgcaggcgccaacgaccgcctgaccacccagatgaaatcc
gtcggcgaagtgatggcgattggccgcacccagcaggaatcgatgcagaaagcgctgcgc
ggcctggaagtgggcgcgaccggtttcgacccgaaagtcagccttgacgacccggaagcg
ctgaccaaaatccgccgcgagttgaaagacgcgggcgccgagcgtatctggtacatcgct
gatgccttccgtgcagggctgtccgttgacggtgttttcaatcttactaacatcgaccgc
tggttcctggtgcagattgaagagctggtgcgcctggaagagcaggtcgccgagcagggc
attaacggccttgatgccgatttcctgcggatgctcaagcgtaaaggcttcgccgatgcg
cgtctggcgaaactcgcgggcgtcagcgagtcggaaatccgcaagctgcgcgaacagtac
aacctgcacccggtctacaagcgtgtggatacctgcgcggcggaattcgccaccgatacc
gcctacatgtactccacctatgaagatgagtgcgaggccaacccgaaccaggatcgcgaa
aaaatcatggtgctgggcggcgggccgaaccgtatcggccagggcattgagttcgactac
tgctgcgtacacgccgcactggcgctgcgcgaagacggctacgagaccatcatggtcaac
tgtaacccggaaacggtttcgaccgactacgacacttccgaccgtctctacttcgagccg
gtgacgctggaagacgtgctggaaatcgtgcgcatcgagaagccgaaaggcgttatcgtg
cagtacggcggccagaccccgctgaaactggcgcgcgcgctggaagcagcaggcgtgccg
gttatcggcaccagcccggatgctatcgaccgcgccgaagaccgcgagcgtttccagcag
gcggtagaccgtctgaagctgaagcagccggcgaacgccaccgtcaccgccattgagatg
gccgttgagaaggcgaaagaaatcggctacccgctggtggtgcgcccgtcttatgtgctg
ggtggccgcgcgatggaaatcgtctacgacgaagccgacctgcgtcgctacttccagacg
gcggtcagcgtctccaacgacgcgccagttctgctggaccgcttcctggacgacgccgtt
gaagtggacgtggacgccatctgcgacggcgaaaaggtgctgattggcggcattatggaa
cacatcgagcaggcgggcgtgcactccggcgactccgcgtgctcgctgccagcctatacc
ttaagccaggaaattcaggacgtgatgcgccagcaggtacagaagctggccttcgagctc
caggtgcgcggcctgatgaacgtccagttcgcggtcaaagacaacgaagtctacctgatt
gaagtgaacccgcgcgccgcgcgtaccgtgccgttcgtctccaaagccaccggcgtgccg
ctggcgaaagtggcggcgcgcgtaatggtcggccagacgctgagcgagcagggcgtgact
aaagaaatcatcccgccgtactactcggtgaaagaagtggtgctgccgttcaataaattc
ccgggcgtcgacccgctgctggggccggaaatgcgctccaccggcgaagtcatgggcgtg
ggtcgcaccttcgcggaggcgttcgccaaagcgcagctcggcagcaactccaccatgaag
aaacagggccgcgcgctgctctcggtgcgtgaaggcgataaagagcgcgtggtggatctc
gccgccaagctgctgaagttcggcttcgagctcgacgcgacgcacggcaccgcgattgtg
ctgggcgaggctggcattaacccgcgtctggtgaacaaggtgcatgaagggcgtccgcac
attcaggaccgtatcaagaatggcgaatacacctacatcatcaacaccaccgcaggccgc
caggcgattgaagactccaagctgattcgccgcagcgccctgcagtacaaagtgcattac
gacacgacgctgaacggcggcttcgccaccgccatggcgctaaacgcggatgccaaagaa
aaagtgatttccgtgcaggagatgcacgcgcaaatcacgaagtaa
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