Cronobacter dublinensis: AFK67_04085
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Entry
AFK67_04085 CDS
T04061
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm00310
Lysine degradation
cdm01100
Metabolic pathways
cdm01110
Biosynthesis of secondary metabolites
cdm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
AFK67_04085
Enzymes [BR:
cdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
AFK67_04085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
ALB65697
LinkDB
All DBs
Position
897947..900085
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPMKELQAALQHQGFQLIWPKNSNDLLKFIEHNPRICGVIFDWD
EYSLDLCCEINQLNEYLPLYAFINTHSTLDVSANDMRMALWFFEYSLGIADDIATRIRQY
TQEYLDNITPPFTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIIGMYAAHAGSTVLI
DRNCHKSLTHLLMMSDIVPLWLKPTRNALGILGGIPKREFTRDAIAQKVAQTPDASWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYKGKSGMSGDRVPGKVFF
ETQSTHKMLAALSQASLIHIKGEYDEETFNEAYMMHTTTSPSYPLVASIETAAAMLRGNP
GRRLINRSVERALHFRKEVQRLREETDSWFFDIWQPEEIDEADCWPITPGDDWHGFTHAD
SDHMYLDPVKVTILTPGMDAQGNMEKEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLWAEDPDFYRNMRVQELAQGIHKLIQQH
DLPDLMLRAFDVLPEMKMTPHEMYQQQVKGNVETVEIEKLIGRVSANMILPYPPGVPLVM
PGEMITEASRAVLDFLLMLCSIGRHYPGFETDIHGAKCGEDGVYRVRVLKSE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatcatcgccatcatggggccgcacggcgtcttctataaagacgagccgatgaag
gagttgcaggcggcgctgcagcatcagggctttcagctgatttggccgaaaaacagcaac
gatctgctgaaatttattgagcataatccacgcatctgcggcgtcatctttgactgggac
gagtacagcctcgatttatgctgtgagatcaatcagcttaatgaatatctgccgctgtat
gcctttatcaatacccactccacactggatgtcagcgctaacgacatgcgcatggcgctc
tggtttttcgaatattcgctcggtattgctgacgatatcgcgacgcgtatacgccagtac
acgcaggaatatctcgacaacatcacgccgccgtttactaaagccctctttacctatgtg
aaagaaggcaaatacacgttctgcacaccgggccatatgggcgggacggcgtatcagaaa
agcccggtcggctgcctgttttacgattttttcggcggcaatacgctcaaggccgatgtc
tccatctcggtgacagagctgggctcgctgcttgaccacaccggcccgcatctggaggcg
gaagagtatatcgcccgcacgtttggtgccgagcagagctatatggtcactaacggcacg
tccacctccaacaaaatcatcgggatgtacgccgcccatgcgggcagtaccgtgcttatc
gatcgcaactgccataagtcgcttacgcacttgctgatgatgagcgatatcgtgccgctg
tggcttaagccgacgcgcaacgcgcttggcattctgggcggcattccgaagcgcgagttt
acccgcgatgcgatagcgcaaaaagtggcgcagacgccggacgccagctggccggtgcac
gcggttattactaactcgacctacgacgggctgctgtataacaccaactggatcaaacag
acgctggacgtgccctcgatccatttcgattccgcctgggtgccatacacccattttcac
ccgatctacaaaggcaaaagcggcatgagcggcgatcgcgtgccgggcaaagtcttcttt
gaaacccagtcgactcacaaaatgctggcagcgctgtcgcaggcgtcgctgattcatatt
aaaggcgagtatgacgaagagacgtttaacgaagcctacatgatgcacaccacgacctcg
ccgagctatccgctggtagcgtcgattgaaaccgcggcggcgatgctgcgcggcaatcca
ggccgacggctcatcaaccgctcggtggagcgcgcgctgcattttcgcaaagaggtgcag
cgccttcgcgaggagaccgacagctggttcttcgacatctggcagccggaggagattgac
gaggcggactgctggccaatcacgcccggcgacgactggcatggttttacccatgccgat
agcgatcatatgtatctcgatccggtgaaagtcaccattctgacgccagggatggacgcg
caaggcaacatggaaaaagaggggatcccggctgcgctggtggcaaaattcctcgacgag
cgcggcgtggtggtggagaaaaccgggccttacaacctgctgtttctgttcagtatcggg
atcgacaaaacccgcgcgatgggcctgctgcgcgggctgacggagtttaagcgcgcttac
gatctcaacctgcgggtgaaaaacatgctgcccgatctctgggcggaggatccggatttc
tatcgcaatatgcgcgtgcaggagctggcgcaggggatccataagcttatccagcagcac
gatctcccggatctgatgctgcgtgcgttcgatgtcttgccggaaatgaaaatgacgccg
cacgagatgtaccagcagcaggtgaagggcaatgtcgaaacggtggagatagaaaagctg
atcgggcgcgtctcggccaacatgatcctgccatatccgcccggcgtgccgctggtgatg
cccggcgagatgatcaccgaggcgtcgcgcgcggtgctcgatttcctgttaatgctctgc
tcgattggccggcactatccaggctttgaaaccgacattcacggggcgaagtgcggcgaa
gacggcgtctatagggtacgtgtcctaaaaagcgagtaa
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