KEGG   Cronobacter dublinensis: AFK67_06560
Entry
AFK67_06560       CDS       T04061                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cdm  Cronobacter dublinensis
Pathway
cdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AFK67_06560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdm03400]
    AFK67_06560
DNA repair and recombination proteins [BR:cdm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AFK67_06560
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AFK67_06560
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 SBDS_domain_II UB2H Kinesin IF2_N DUF87 DUF8810 AAA_22 Microtub_bd DUF4686
Other DBs
NCBI-ProteinID: ALB66150
LinkDB
Position
1429671..1431692
AA seq 673 aa
MSKPFKLNSAFKPSGDQPEAIRRIKEGLEDGLAHQTLLGVTGSGKTFTMANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGTVDSIIQR
FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTVYVSATPGNYELEKSGSEIIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMARAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILALG
ENIAKTKPKGRGKGRSVADVEAAELALTPKALQQKIHQLEAQMVQHAQNLEFEEAAQLRD
KLHQLRELFIAAS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagcaaaccgttcaaactcaactccgctttcaaaccttccggcgaccagccagaggct
atccgccgcatcaaggaagggctggaggacggactggcgcaccagacgctgctgggggtg
acgggctcgggtaagaccttcaccatggcgaacgtgatagccgatttgcagcgcccgacg
atggtgctggcgcccaacaaaacgctggccgcgcagctctacggcgagatgaaagagttc
ttcccggagaacgccgtcgagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccgagctctgacacctttatcgaaaaggacgcgtcggtgaacgagcatattgag
cagatgcgtctgtcggcgaccaaagcgctgcttgagcgccgcgatgtcgtggtggtggcg
tcggtgtcggctatctacggtctgggcgatcctgatctctatctgaaaatgatgctgcat
ctcaccaaagggatgattatcgaccagcgcgctatcctgcgccgtctcgcggagctgcaa
tatacccgcaacgaccaggcgtttcagcgcggcaccttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggaatcggacgacctggcgttgcgcgtcgagctgtttgacgaagag
gtggagcggctgtcgctgttcgacccgctgaccggcaccgtggattccatcatccagcgt
ttcaccgtctacccgaaaacgcactacgtcaccccgcgcgagcgcatcgtgcaggcgatg
gaagagattaaagtggagctggcggagcgtcgcaaggtactgcttgagaacaataaactg
ctggaagagcagcgtcttacccagcgcacccagtttgacctcgaaatgatgaacgagctc
ggctattgctcgggcatcgagaactactcgcgctatctctcaggccgcgggccgggcgag
gcgccgccgacgctgtttgactacctgccggcggacgggctgctggttatcgacgaatca
cacgttaccattccgcaaatcggcgggatgttccgcggcgaccgggcgcgcaaagagacg
ctggtggaatatggcttccgcctgccgtcggcgctggataaccgtccgctgaaatttgaa
gagttcgaagcgctggcgccgcagacggtttacgtctcggcgacgccgggcaactatgag
ctcgaaaagtcgggcagcgaaattatcgatcaggtggtgcgcccgaccgggctgctcgac
ccgattatcgaagtgcgcccggtagcgacgcaggtggacgatctgctgtcagagatccgc
aagcgcgtggccatcaacgagcgcgtgctggtcacgacgctcaccaagcgcatggccgaa
gatttaaccgaatatctggaagagcacggcgagaaagtgcgctatctgcactcggatatc
gacacggtcgaacgtatggaaattattcgcgatctgcgtcttggcgagttcgacgtgctg
gtgggtatcaacctgctgcgtgaggggctggatatgcccgaggtctcgctggtggcaatc
cttgacgccgataaagagggcttcctgcgttccgagcgctcgcttatccagaccatcggc
cgcgcggcgcgtaacgtcaacggtaaagcgattctctacggcgacaaaatcacgccatca
atggcgagagccatcggcgaaaccgagcgccgccgcgagaagcagcagcgttataacgaa
gagcacggcatcgtgccgcaggggctcaacaagaaagtggtggatattctggcgcttggc
gagaatatcgccaaaaccaagccgaaaggccgcggcaaaggccgcagcgtagccgatgtc
gaagccgctgaactggcgctcacgccgaaagcgttgcagcagaaaattcatcagctcgaa
gcgcagatggtgcagcacgcccagaacctggagttcgaagaggccgcgcagctgcgcgac
aagctccatcagctgcgcgagctgtttatcgccgcgtcgtaa

DBGET integrated database retrieval system