Cronobacter dublinensis: AFK67_09475
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Entry
AFK67_09475 CDS
T04061
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cdm
Cronobacter dublinensis
Pathway
cdm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFK67_09475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdm02000
]
AFK67_09475
Transporters [BR:
cdm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AFK67_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Glyco_hydro_62
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ALB66699
LinkDB
All DBs
Position
2079085..2080230
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AA seq
381 aa
AA seq
DB search
MTHSFALSAAAALCLTTCIASAAEPLSQLGQGEGRLDIIAWPGYIERGQTDKAYDWVTEF
EKSSGCAVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKN
VDPRLVKGEWFNLNGKVYGTPYQWGPNLLMYNTKAFPTPPDSWAVLFVKQALADGKSNQG
RVQAYDGPIYIADAALYVKATQPELGITDPYQLTEAQYGAVLKALRDQHQLIHRYWHDTT
VQMSDFKNEGVVAASAWPYQANALKNEGQPIATVFPKEGVTGWADTTMLHADAKHPNCAY
KWMDWSLTPKVQGDVAAWFGSLPAVPEGCKASTLLGEKGCETNGFTFFDKIAFWKTPVAQ
GGKYVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacccattctttcgcgcttagcgcggccgccgcgctgtgcctgacgacctgtatcgcc
agcgccgccgagccgctttctcaactcggccagggtgaaggccgcctcgatatcattgcc
tggcctggctacatcgaacgcggccagacggataaagcctacgactgggtaaccgagttc
gaaaaatcctccggctgcgcggtgaacgtcaaaaccgcagcgacgtcggatgaaatggtc
agcctgatggccaaaggcggctatgatctggttaccgcctcgggcgacgcctcgctgcgt
ctcatcatgggcaaacgcgtccagccgattaacactgcgcttatccccaactggaaaaac
gtcgatccgcgcctggtaaaaggcgaatggttcaacctcaacggcaaggtctacggcacg
ccgtaccagtggggaccgaacctgctgatgtataacaccaaagccttcccgacgccgccg
gacagctgggccgtgctgtttgtcaaacaggcgctggcggatggcaaatccaaccagggc
cgcgtgcaggcctatgacgggccgatttatatcgctgacgccgcgctctacgtcaaagca
acccagccggaactcggcatcaccgacccttaccagcttactgaggcgcaatacggcgcg
gtactgaaagcgctgcgcgatcagcatcagctgatccaccgctactggcatgacaccacc
gtgcagatgagcgattttaaaaacgagggcgtggtggccgccagcgcctggccgtatcag
gcgaatgcgctgaaaaacgaaggccagcccatcgctaccgtctttccgaaagagggcgtg
accggctgggcggacaccaccatgctgcacgctgacgcgaaacaccccaactgtgcctac
aaatggatggactggtcgctgacgccgaaagtgcagggcgatgtcgccgcctggttcggc
tcgctcccggcggtgccggaaggctgtaaggccagcacgctgctcggggagaagggctgc
gaaaccaacggctttaccttcttcgacaaaatcgccttctggaaaacgccggtcgcgcag
ggcgggaaatacgtaccgtacagccgctggacgcaggattacatcgctattatgggcggt
cgctaa
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