Cronobacter dublinensis: AFK67_11815
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Entry
AFK67_11815 CDS
T04061
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdm03009
]
AFK67_11815 (yebU)
Enzymes [BR:
cdm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
AFK67_11815 (yebU)
Ribosome biogenesis [BR:
cdm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AFK67_11815 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_23
PCMT
NSUN5_fdxn-like
TruB-C_2
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ALB67128
LinkDB
All DBs
Position
2607253..2608692
Genome browser
AA seq
479 aa
AA seq
DB search
MAQFGSVCLPEAFLDVMREAMPAGLAMDDFIAACQRPLRRSIRVNTLKISVEAFLAQVES
YGWQLTPVPWCAEGFWIARDDEALPLGSTAEHLSGLFYIQEASSMLPVTALFADGNAPER
VMDVAAAPGSKTTQIAALMQNQGFILANEYSASRVKVLHANISRCGIRNVGLTHFDGRVF
GAALPEQFDAILLDAPCSGEGVVRKDPDALRNWSVQSNQEIAATQRELIDSAFHALAPGG
TLVYSTCTLNLEENQQTVRWLLARYPQAVETLSLEGLFPGAEAALTEEGFLHVFPQIYDC
EGFFVARLRKTAPIAPLPAPTYKVGAFPFAPMKTREAQAVTAAAGKVGLAWDDTLALWQR
DKEIWLFPQAFTPFIGKVRFSRTGVRLAEVHNKGYRWQHEAVVALAGSDNPLAFELTAEE
AQEWYRGRDVWPQTPPDSDDVIVTFQHQPLGLAKKVGSRLKNSYPRELVRDGVLFSAPL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaattcggttctgtctgccttcctgaggcttttcttgatgttatgcgagaggcg
atgcccgcagggcttgcgatggacgatttcatcgccgcctgtcagcgtccgctgcgccgc
agtattcgcgtcaacacgctgaaaatcagcgtcgaagcctttctcgcacaggttgagtct
tacggctggcagctgacccccgtgccgtggtgcgctgaaggtttctggatagcgcgcgac
gacgaggcgctgccgctcggcagcaccgccgagcacttaagcggcctgttttatattcag
gaggcgagctccatgctgccggtcacggcgctttttgccgatggcaacgcgcccgaacgg
gtgatggatgtcgccgccgcgccgggctcgaaaaccacccagatcgctgcgctgatgcaa
aaccagggctttattctcgccaatgagtattccgccagccgggtcaaagtgctgcacgcc
aatatcagccgctgcggcatccgcaatgttggcctcacccacttcgacggccgcgttttc
ggcgccgcgctccctgaacagttcgacgccattctgctggacgcgccctgctccggcgaa
ggcgtggtgcgaaaagatccggatgcgctgcgtaactggtcggtacaaagtaatcaggag
attgccgccacccagcgcgagcttatcgacagcgccttccacgcgctggcacccggcggc
acgctggtctattccacctgcacgctgaacctggaagaaaaccagcagacggtgcgctgg
ctgctggcgcgctatccgcaggcggtggagacgctctcgcttgagggtctattccctggc
gcggaagcggcgctgaccgaagagggctttctgcatgtcttcccgcagatttacgactgc
gaaggattttttgtcgcgcggctgcgtaaaaccgccccgatcgcgccactgcctgcgccg
acgtataaagtcggcgccttcccgtttgcaccgatgaaaacccgcgaagcgcaggcggtc
acggccgcggcaggcaaggtgggcctggcgtgggacgacacgctggccctgtggcagcgc
gataaagagatctggctgttcccacaggccttcacgccgtttatcggcaaggtgcgattc
tcacgcactggcgttcggctggctgaggtccataataaagggtaccgctggcagcatgag
gccgtggtggcgctggccggcagcgataacccgctcgcgtttgagctcaccgccgaagag
gcgcaagagtggtatcgcggtcgcgatgtctggccgcagacgccgccggactctgacgac
gtcatcgtcacgttccagcatcagccgctggggcttgcgaaaaaagtcggcagccggctc
aagaacagttatccgcgtgaactggtacgcgatggggtactgtttagcgcgccgttgtaa
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