Cronobacter dublinensis: AFK67_14030
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Entry
AFK67_14030 CDS
T04061
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdm03032
]
AFK67_14030
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_14030
Enzymes [BR:
cdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AFK67_14030
DNA replication proteins [BR:
cdm03032
]
Prokaryotic type
DNA Topoisomerases
AFK67_14030
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFK67_14030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALB67534
LinkDB
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Position
complement(3056549..3059185)
Genome browser
AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMPLKDILAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIAQAWDLGNV
KAMLEGAGDDAARPEWLEPEFGIRDGKYWLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTQIAELLHILGSADRLMEVIREELELIRDQFGDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAVRPMGRTATG
VRGIRLGEGDSVVSLIVPRGEGAILTATQNGYGKRTAVEEYPTKSRATKGVISIKVTDRN
GPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGDDEIAPETDVDDDAVDDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggtcaacattgaggaagagttaaagaactcc
tatctggattatgcgatgtcggttattgtcggccgcgcgcttccggatgtccgagatggc
ctcaaaccggtacaccgtcgcgtactttacgccatgaacgtgttgggcaatgactggaat
aaagcctacaaaaaatccgcccgtgtcgttggtgacgtaatcggtaaataccatccccac
ggtgattccgccgtttacgataccatcgtgcgtatggcccagccgttctcgctgcgctac
acgctggtggatggtcagggcaacttcggttctatcgacggcgactccgccgcggcgatg
cgttatacggaaatccgtctggcgaagatcgcccatgaactgatggccgacctcgataaa
gaaaccgttgattttgtagataactacgacggcacggaaaaaatccctgacgtcatgccg
accaaaatcccgaacctgctggtgaacggggcttccggcatcgcggtcgggatggccact
aacattccgccgcataacctgacggaagtgattaacggctgcctcgcctatatcgatgat
gaagacatcagcatcgaagggctgatggagcatatccctggcccggatttcccgaccgcc
gctatcatcaacggccgtcgcggcattgaagaggcgtatcgcaccggtcgcggtaaaatc
tatattcgcgcgcgcgcggaagtagaagtcgatccgaaaaacggccgcgaaaccatcatc
gtgcacgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaatcgccgagctg
gtgaaagacaaacgcgtcgaaggcatcagcgcgctgcgcgatgagtctgacaaagacggt
atgcgtatcgttattgagatcaaacgcgacgccgttggcgaagtggtgctcaataacctg
tactcccagacgcagcttcaggtctcgttcggcatcaacatggtggcattgcaccatggc
cagccgaagatcatgccgctgaaagatattctggcggcgtttgttcgccaccgccgtgaa
gtggtgacccgtcgtaccattttcgaactgcgcaaagcgcgcgatcgcgcgcatattctg
gaagcgctggccattgcgcttgcgaacatcgacccgatcattgaactgattcgtcgcgcc
ccgacgccggcggaagcaaaagcgggcctgatcgcgcaggcgtgggatctcggcaacgtg
aaagcgatgctggaaggcgcgggcgatgacgccgcgcgtccggagtggctggagccggaa
ttcggtattcgcgacggtaaatactggctgaccgagcaacaggcccaggcgatcctcgac
ctgcgtctgcaaaagctcaccggccttgagcatgaaaaactgctcgacgaatataaagag
ctgctgacccagattgccgagctgctgcacattctcggcagcgccgatcgcctgatggaa
gtgatccgcgaggagctggagcttattcgcgatcagtttggcgacgagcgccgcaccgaa
atcaccgccaataccgctgatatcaacattgaagatctgatcaaccaggaagatgtggtg
gtcaccctgtctcaccagggctatgtgaagtatcagccgctgacggattacgaagcgcag
cgccgcggcggtaaagggaaatctgccgcgcgtattaaagaagaagactttatcgaccgc
ctgctggtggctaacacccacgatacgatcctctgcttctccagccgtggtcgtctctac
tggatgaaagtctatcagctgccggaggcgagccgtggcgcgcgcggtcgtcctatcgtt
aacctgctgccgctggaagcgaacgagcgtatcaccgctatcctgccggtgcgcgagtac
gaagagggcgttaacgtcttcatggcgaccgccagcgggaccgtgaagaaaacggcgctg
accgagttcagccgtccgcgtaccgccggtatcatcgcggtgaacctgaacgaaggcgat
gagctgattggcgttgacctgacggccggtaaagacgaagtcatgctgttctccgcgcag
ggcaaagtggtgcgctttaaagaagacgccgtgcgtccgatgggccgtaccgccaccggc
gtgcgcggtattcgtctcggcgagggcgacagcgtggtgtcgcttatcgtgccgcgcggc
gaaggcgctatcctgaccgccacccagaacggttacggcaagcgtaccgcggtggaagag
tacccgaccaagtcgcgcgcgaccaaaggggttatctccattaaagtcaccgatcgcaat
ggcccggtggtcggcgcggtgcaggttgacgacgcggatcagatcatgatgatcaccgac
gccggtacgcttgtgcgtacgcgcgtgtcggaaatcagcgtggtgggccgtaacacccag
ggcgttatcctcatccgtactgcggaagatgaaaacgtggtgggtctgcagcgcgtagcc
gagccggtggatgacgaggaactcgactccatcgacggcagcgtagcggaaggcgatgac
gaaatcgcgccggaaaccgatgtcgatgacgacgcggtggacgacgccgacgaataa
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