Cronobacter dublinensis: AFK67_16665
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Entry
AFK67_16665 CDS
T04061
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFK67_16665 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_16665 (recC)
Enzymes [BR:
cdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AFK67_16665 (recC)
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK67_16665 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALB68010
LinkDB
All DBs
Position
complement(3606511..3609885)
Genome browser
AA seq
1124 aa
AA seq
DB search
MLRVYHSNRLDVLEAIMEFIVEQQPLPDPFEPEIVLVQSTGMAQWLQMSLAQKFGIAANI
EFPLPASFIWDMFVRVLRDIPQESAFTKQNMSWKLMKLLPGMLASPDFDMLRHYLHDDED
KRKLFQLASRVADLYDQYLVYRPEWLTRWEAGDMVDGLGEPQRWQAPLWQALVQHTAALG
QPQWHRANLYQRFINTLENAQSCPEGLPARVFICGISALPPVYLQALQALGKHIDVHLLF
TNPCRYYWGDIQDPAFLARLLSRQRKLHAREGTAPLFKNSEAAPALFNEEGEQEVGNPLL
ASWGKLGRDYTYLLSGLERFEEMDVFVDIEPDNLLHSLQFDLLELRNQALAGVTLEEFER
SDAKRCLHPEDRSITVHVCHSPQREVEILHDQLLQMLEADPQLTPRDIIVMVADIDSYSP
FIQAVFGSASQERYLPFAISDRRARQAHPALQAFITLLSLPDSRFVSEDVLALLEVPSLS
ARFNISEEGLRFLRQWVNESGVRWGMDDDNVRELELPATGQHTWQFGLTRMLLGYAMESH
LGEWQSVLPYDESSGLIAELVGHLAELLMQLNLWRKGLSQARPLAEWLPVCREMLDSFFA
PDAETEAALALIEQQWQAIIEQGIGAHYEDEVPLNLLRDELSKMLDQERISQRFLAGPVN
FCTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
ISAQQQLYISYIGRSIQDNSEKYPSVLVQELVDYLAQSHYLPGDESLNCDDSAQKVKAHL
MRLYPRTPFDAENFQPAREIQSYAREWLPAASEQGEAHPEFIKPLEPITLEELPFEQFQR
FWRHPVRAFFQLRLKVNFRTEESELPDAEPFTLDSLGRYHMNQQLLNTLVEQKDPEALYR
RYRAAGELPYGAFGELFWESQLQEMQVLADRVLAERHSGESREIALELGNVEMTGWLQHV
QPDGLLRWRPSLLRVEHGMQLWLEHLVYCACGGEGTSRLYGRKDSCWRFPPVPREQAEHY
LCELIAGFQQGMREPLILLPQSGGEWLKACYDVKNDAILWDEETQQKARNKLIQAWTGNQ
MVEGEGTDIWYQRLWRNLEPEYYEAIIHEAQRYLLPLFRHHQPG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggtttatcactccaaccggcttgatgtgttggaggcgatcatggagttcatt
gttgaacaacagccgcttcccgatcctttcgagcccgaaatcgtcctggtgcagagcacc
ggcatggcgcagtggttgcagatgagcctggcacagaaattcggcatcgccgcgaatatt
gagtttccgcttccggcaagtttcatctgggacatgttcgttcgcgtattgcgtgatatt
ccgcaggaaagcgcctttaccaagcaaaatatgagctggaagctgatgaagctgctgccg
ggcatgctcgcatcgccagatttcgacatgctgcgtcactaccttcacgatgacgaagac
aagcgtaagctcttccagctcgcttcacgcgtggccgatctctacgatcaatatctggtg
tatcgcccggaatggctgacgcggtgggaagcgggtgatatggtcgatggtctcggcgag
ccgcagcgctggcaggcgccgctctggcaggcattggtgcagcataccgcagcgttgggg
cagccgcagtggcatcgcgccaacctgtatcagcgttttattaatacgcttgaaaacgcg
caatcctgcccggaagggcttcccgcgcgcgtgttcatctgcggcatttcggcgctaccg
ccggtttatttacaggcgctacaggcgttgggcaaacatatcgatgtccacctgctcttc
acaaacccgtgccgttattactggggcgacattcaggatcccgccttcctcgcgcgcctg
ttaagccgccagcgtaagctgcatgcgcgggaaggcaccgcgccgcttttcaaaaatagc
gaagcggcgcccgccttgtttaatgaagaaggcgaacaggaggtagggaacccgctgtta
gcctcctggggcaagctgggccgcgattatacctatctgctttccggccttgagcggttc
gaagagatggatgtgtttgttgatatcgaacccgacaatctgctgcacagcctgcaattt
gatctgctggagctgcgcaatcaggcgctggcgggcgtgacgctcgaagagtttgagcgc
agcgacgcaaaacgctgtctccatccagaagatcgcagcattaccgtgcatgtttgccac
agcccgcagcgggaagtcgaaatcctgcacgatcagctgttgcaaatgctggaggcggat
ccgcagctcacgccgcgcgacatcatcgtgatggtcgcggatatcgacagctacagccct
tttatccaggccgtctttggcagcgcaagccaggagcgctatctgccattcgccatttca
gatcgccgcgcccgccaggcgcacccggcgctgcaggcgtttattacgctgctctcactg
cctgacagccgctttgtatcggaagacgtactggcattgcttgaagtgccgtcgctctcc
gcccgctttaatatcagcgaagaagggctgcgtttcctgcgccagtgggtcaatgaatcc
ggggtgcgttggggtatggatgacgacaacgtgcgtgaactggaactgcctgcgacgggc
cagcacacctggcagttcggtcttactcgtatgctgctgggctatgccatggaaagccat
cttggcgaatggcaatcggtactgccctatgatgaatccagcgggctgattgccgagctg
gtcggccaccttgccgaacttttgatgcagcttaatctctggcgcaaggggctctcgcag
gcgcggccgctggccgagtggctgccggtttgccgcgagatgctggacagctttttcgcg
ccggatgccgaaaccgaagccgcgctggcgcttattgagcagcagtggcaggccataatc
gaacagggcattggcgcgcactatgaagacgaggtgccgcttaatttactgcgcgacgag
ctttcgaaaatgctcgatcaggaacgcatcagccagcgttttctcgccgggccggtcaac
ttctgcaccctgatgccgatgcggtctattccgttcaaagtggtgtgcctgctcgggatg
aacgacggcgtttatccgcgggcactcgcaccgttagggtttgatctgatgagccagaag
ccgcagcgcggggatcgcagccgacgtgacgacgaccgctatctcttccttgaggcgctg
atctccgcccagcagcagctttatatcagctacattgggcgctccattcaggataacagc
gagaagtacccatcggtgctggtgcaggagctggtggattacctggcccagagccattat
ctgccaggcgacgagtcgcttaactgcgacgacagcgcgcaaaaggtgaaagcccacctg
atgcggctctacccccgcacgcctttcgatgcggaaaactttcagcctgccagagagatc
cagagttacgcacgcgagtggctgcctgccgccagcgagcagggcgaagcgcacccggaa
tttatcaaaccgctggagccaattacgctggaagagctgccgtttgagcagtttcaacgt
ttctggcgtcacccggtacgggcgtttttccagctacggctgaaggtcaatttccgcacg
gaagaaagcgaactcccggatgccgagccttttacgcttgatagtctgggacgctatcac
atgaaccagcaactgctgaacacgctggtggagcagaaggaccccgaagcgctctaccgg
cgctaccgggcggcaggagaactcccctatggcgccttcggcgaactgttctgggaaagc
cagttacaggagatgcaggtactggcggatcgggtgcttgccgagcgccatagcggtgaa
agccgggagatagcgcttgagcttggcaacgtagaaatgaccggctggctgcaacatgtg
cagccggatggcctgttgcgctggcgtccttctctgctgcgcgttgaacacggaatgcaa
ctttggcttgagcatctggtctactgtgcctgcggaggcgaaggaaccagccggctttat
ggtcgaaaagacagctgctggcgttttccaccggtgccgcgcgagcaggcggaacattac
ctgtgcgaactcatcgcaggcttccagcaggggatgcgcgagcccctgattcttttgccc
cagagcggaggcgagtggctaaaagcctgttacgacgtgaaaaacgacgccattttgtgg
gatgaagaaacccagcagaaggcgcgcaataagctgattcaggcctggacgggcaaccag
atggtggaaggtgagggcacggatatctggtatcagcgtctgtggcgcaaccttgagcct
gagtattacgaggccattatccatgaagcccagcgttacctgttgccgctgtttcgccat
caccagcccggttaa
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