Cronobacter dublinensis: AFK67_17350
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Entry
AFK67_17350 CDS
T04061
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK67_17350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_17350
Enzymes [BR:
cdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
AFK67_17350
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFK67_17350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALB68146
LinkDB
All DBs
Position
complement(3753818..3754324)
Genome browser
AA seq
168 aa
AA seq
DB search
MINDILEPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIHLAGFTERQLKPEEERHLL
DTRCGITKLVERPTVQANEVDVKELHEGGRNLVKKIEDFQPDALAVLGKKAYEQAFSQRG
VKWGKQKLKIGETEIWVLPNPSGLNRASLDKLVEAYRELDEALLARGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgatattcttgaaccgggcctgcgcgtggtcttttgcggaatcaatccggga
aagtcgtcagcgcataccggttttcatttcgcgcatccgggtaaccgcttctggaaggtt
atccatctggcggggtttacggagcgccagttaaaacccgaagaggagcggcatctgctg
gatacgcgctgtggcatcacgaaactggttgagcgcccgacggtgcaggcgaacgaggtg
gacgtgaaagagctgcatgagggcggacgtaatctggtgaaaaaaattgaggacttccag
ccggacgcgctcgcggtgctcggtaaaaaagcgtatgagcaggcgttcagccagcgcggc
gtgaagtggggcaagcaaaagctcaagatcggcgagacggaaatttgggtgctgccgaac
cccagtgggcttaatcgcgcgtcgctggataagctggtggaagcctaccgggaactggat
gaggcgctgctggctcgcggcagataa
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