Cronobacter dublinensis: AFK67_18120
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Entry
AFK67_18120 CDS
T04061
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdm02000
]
AFK67_18120
Transporters [BR:
cdm02000
]
Other transporters
Pores ion channels [TC:
1
]
AFK67_18120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ALB68290
LinkDB
All DBs
Position
3910026..3913358
Genome browser
AA seq
1110 aa
AA seq
DB search
MRLILYVLLAWSLSFWANAATAPDEKQIAQELEQAKAAKNQPDQAQVVETLQSAQNALEE
RKASLERAKQYQQVIDNFPKLSQSLRQQLNNLRDEPRRVPTGLTTDALNQEILQVSSQLL
EKSREAQQEQDRAREIADSLSQLPQQQTDARRQLNEMERRSGASTGSSALGAAQLLAQQA
ESAQLKARVDELELAQLSASNRQELARLRSELAQKQSEQLDTYLQALRNQLNSQRQQEAE
RALESTELLAENSANLPPAIVEQFNVNRELSRALNQQAQRMDLVASQQRQATSQTMQVRQ
ALTTLREQSQWLGVSNVLGEALRAQVSRLPEMPKLQQLDTEMAQLRVHRLRYEDQLNKQP
QLRQLRQADGKPLTAEQNRILDAQLRTQRELLGSLLQGGDTLILELTKLKVANSQLEDAL
KEVNEATHRYLFWTSDVSPLSISWPVDIVQDLRRLISLDFFGQLGKAAVMMVTSKETLLP
LFGALLLVGFSISSRRHFTAFLERSSARVGKVTQDHFWLTMRTVFWSILVASPLPVLWAT
LGYGLREAWPWPIAVAVGDGVTATVPLLWVVMISAAFARPNGLFTTHFGWPRNRVARAMR
YYLMSIGFIVPLIMALITFDNLNDREFSGSLGRLCFVLICGALAIVTLSLKRAGIPLYLD
NEGNGDNWVNRLLWNLMLCAPLMAILAAAVGYLATAQALLARLETSVAIWFLLLVIYHII
RRWMLIQRRRLAFDRARSRRAEILAQRARGEEEPHHGHSTEGSVEVDVAELDLDAISAQS
LRLVRSILTLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESIEPITLGAVLIAI
LVFIVTTQLVRNLPALLELVVLQHLELTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWS
KLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATT
ISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSDANSEEVTQLLYRAAEKCS
YVIDNPSPEVFLVDLQQGIQIFELRIHAAEMGHRMPLRHEIHQLILQGFREHGIDMPFPP
FQMRLESLDGKRMARTLSSAGRASRAPGSM
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatcctttacgtgctgctggcatggagcctgagcttttgggcgaacgccgca
accgcgcctgatgaaaaacagatagcgcaggagctggagcaggccaaagcggccaaaaac
cagcccgatcaggcgcaagtggttgaaacgctgcaatctgcgcaaaacgcgctcgaggag
agaaaagcctcccttgagcgcgccaaacaatatcaacaggttatcgataatttccccaag
ctgtcgcaatcgctgcgtcagcagctcaataacctgcgcgacgagccgcgccgggtgccg
acagggctcaccactgacgcgctcaatcaggagatcctccaggtcagtagtcagttgctg
gagaagagccgcgaagcgcagcaggagcaggatcgcgcccgcgaaatcgccgactcctta
agccagcttccccagcagcaaaccgacgcgcgccgccagcttaacgagatggagcgccgt
tcgggcgcgtcgaccggttccagcgcgctcggggcggcgcagcttctcgcccagcaggcg
gaatccgcacagcttaaagcgcgcgtggatgaactggaactcgcgcagctctccgccagc
aaccgccaggagctggcgcgcctgcgctccgaactcgcgcaaaagcagagcgaacagctc
gatacttacctccaggcgctgcgtaaccagttaaacagccagcgccagcaggaagccgag
cgcgcgctggaaagcaccgagctgctggcggaaaacagcgccaacctgccgccggccatc
gtcgaacagttcaacgtcaaccgcgagctctcccgcgcgctgaaccagcaggcgcagcgc
atggatcttgtcgcgtcgcagcagcgtcaggccaccagccagacgatgcaggtgcgtcag
gcattaaccacgctgcgcgaacagtcgcagtggcttggcgtctccaatgtgcttggcgag
gcgcttcgtgcgcaggtctcacgcctgccggaaatgccgaagctgcaacagctggatacc
gaaatggcccagttgcgcgtgcatcgactgcgctatgaggatcaactcaacaaacagccg
cagctgcgccagcttcgtcaggccgacggcaagccgctgacggcggagcagaaccgcatt
ctcgacgcccagttgcgcacccagcgcgaactgctcggctcgctgttgcagggcggcgat
acgttaattcttgagctcaccaagctgaaagtggccaacagccagcttgaggatgcgctg
aaggaagtgaacgaggcaacgcaccgttatctgttctggacctcggatgtcagcccgctc
agcatcagctggccggtggatatcgttcaggacttgcgtcgtcttatctcgctcgacttt
ttcggccagctcggcaaagccgccgtgatgatggtcaccagcaaagaaacgctgctgccg
ctcttcggcgcgctgctgctggtgggctttagcatcagctcccgccgccatttcaccgcg
tttctggagcgttccagcgcgcgcgtcggtaaggtcacgcaggaccatttctggctgacc
atgcgtacggtgttctggtcgattctggtggcctcgccgctgccggtgctctgggcgacg
ctcggctatgggctgcgcgaagcctggccctggcctatcgccgtggcggtaggcgacggc
gtgaccgcgaccgtgccgctgctgtgggtcgtgatgatctcggcggccttcgcccgcccg
aatggcctctttaccacacacttcggctggccgcgcaaccgcgtcgcccgcgcgatgcgc
tactacctgatgagcatcggctttatcgtgccgcttatcatggcgctgatcaccttcgat
aacctcaatgaccgcgaattctccggctcgctgggacgtctgtgcttcgtgctgatttgc
ggcgcgctggccatcgtgacgctcagcctcaagcgcgcgggcattccgctctatctggat
aacgaaggcaacggcgataactgggtcaaccggctgctatggaatctgatgctgtgcgcg
ccgctaatggcgatcctcgccgcggccgtcggctatctcgccaccgcgcaggcgttgctg
gcgcgcctggaaacctccgtagccatctggttcctgctgctggtcatctaccacattatt
cgccgctggatgcttatccagcgccgtcgtctggcctttgaccgcgcccgctcgcgccgt
gcggaaatcctggcccagcgcgcccgtggcgaagaagaaccacatcacgggcacagcacc
gagggcagcgttgaggtagatgtcgccgagctcgatctcgacgccatcagcgcccagtcg
ctgcgcctggtgcgctccatcctgacgcttatcgccctgctgtcggtaattgtgctgtgg
tcggaaattcactcggcgtttggattccttgagaatatttcgctgtgggatgtcacctca
accgttcagggcgtcgagagcattgagcccattacgcttggcgcggtgctgatagccatt
ctggtgtttatcgtcaccacgcagctcgtgcgcaacctgcccgcgcttctggagctggtc
gtgctgcaacatctggagctgacgcccggcaccggctacgccattaccaccatcaccaaa
tatctgctgatgctgattggcggtctggtgggcttctcgatgattggtattgaatggtcg
aagttacagtggctggtggcggcgctcggcgtcgggctcggtttcggcctgcaggaaatt
ttcgctaactttatctcgggcctgattattctctttgaaaaaccgattcgtatcggcgat
accgtgaccatccgcgatttaacgggcagcgtgacgcgcattaatacgcgtgccaccacc
atcagcgactgggaccgcaaagagattatcgtgccgaataaagcgtttatcaccgagcag
tttatcaactggtcgctttcggattccgtcacccgcgtggtgctgacggtgcctgcgccg
tcggatgccaatagcgaagaggtgacgcagttgctttaccgcgccgccgagaagtgcagc
tatgtgatagataacccgtcgccggaagtctttttggtcgatttgcagcagggtattcag
attttcgagctgcgtatccatgccgctgaaatggggcaccgcatgccgctgcgccacgag
atccaccagctgattttgcagggtttccgcgaacacggtatcgatatgccgttcccgccg
ttccagatgcgtctggagagtctcgacggcaagcgtatggcgcgaacgttaagctctgcc
gggcgcgccagccgcgcgccgggaagtatgtaa
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