Cronobacter dublinensis: AFK67_18725
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Entry
AFK67_18725 CDS
T04061
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFK67_18725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdm03021
]
AFK67_18725
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_18725
Enzymes [BR:
cdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFK67_18725
Transcription machinery [BR:
cdm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFK67_18725
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFK67_18725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALB68396
LinkDB
All DBs
Position
complement(4045633..4046622)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVVLTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctttcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcacgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagtcgtactt
actctgaataaatctggcattggccctgtaaccgcagccgacatcacccatgacggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgagaacgcatctatc
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgatcggccgtctgttggtcgacgcttgctacagccctgta
gaacgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcgaccatcctggcagaacaacttgaagctttcgttgacttacgtgatgttcgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacaacgtaccgaggttgagttgctgaaaacgccgaacctcggtaagaaatctctt
actgagattaaagatgtgctggcttcccgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgcagatgagtaa
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