Castellaniella defragrans: BN940_01316
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Entry
BN940_01316 CDS
T03058
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, large permease component
KO
K11690
TRAP-type transport system large permease protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN940_01316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_01316
Transporters [BR:
cdn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BN940_01316
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
CDM22740
UniProt:
W8X8A6
LinkDB
All DBs
Position
complement(278113..279411)
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AA seq
432 aa
AA seq
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MIPTLLFALFVVLMVIGVPVGIALGAAGTLAIALANPDTHWFGLMAVSQSFYAGLAKYPL
LAIPMFVLVGSIFDRSGVAAKLVRLAQSITGNGPGMLAVVAITVAMFLGGISGSGPACAA
AVGAIMIGAMNRAGYPRAYSASVVAAGAATDILIPPSIAMIVYSVLVPQASVPALFAAGM
FPGILAGIGLIIPAVWLARRHKMGAAARAEPRPPFWRSLFEAIPGLAAPVIILGGMRMGY
FTPTEAAVVAVFYGLLIGMLVHRTIRVRDLFPILREAGELSAVIMLIVTLAGIFAWSLST
LSIIDPITHAIVHSGLGEYSVLTLLILLLIVAGMFLDGISIFLIFVPLIQPVAMAFGWDL
VWLGVVLTLMVAVGQFTPPVAVNLMVSSKIARIPMESTVPWVLWLVGGMLCTLVLVVIFP
QIALWLPHYLGY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatccccaccctgctgttcgcgctcttcgtcgtgctgatggtgatcggcgtgcccgtg
ggcatcgccctgggggcggccggcaccctggccatcgccctggccaatcccgacacccac
tggttcggcctgatggcggtgtcgcagagcttctacgccggcctggccaaataccccctg
ctcgccatccccatgttcgtgctggtgggctcgatcttcgaccgctcgggcgtcgccgcc
aagctggtgcgcctggcccagtccatcaccggcaacggtcccggcatgctggccgtggtc
gccatcaccgtcgccatgttcctgggcgggatctccggctccggcccggcctgcgccgcc
gccgtgggcgccatcatgatcggcgccatgaaccgcgccggctatccccgcgcctactcg
gccagcgtggtggcggcgggcgcggccaccgacatcctgatcccgccctcgatcgccatg
atcgtctattcggtcctggtgccgcaggcctcggtgcccgccctgttcgccgccggcatg
ttccccggcatcctggcgggcatcgggctgatcatcccggccgtctggctggcgcggcgc
cacaagatgggcgcggccgcccgcgccgagccccgcccgcccttctggcgcagcctgttc
gaggccatcccgggcctggccgcccccgtcatcatcctgggcggcatgcgcatgggctat
ttcacgcccaccgaggccgccgtggtggccgtgttctacggcctgctcatcggcatgctg
gtgcaccgcaccatccgcgtgcgcgacctgttccccatcctgcgcgaggccggcgagctg
tccgccgtcatcatgctgatcgtcacgctggcggggatcttcgcctggtcgctgtccacc
ctgtcgatcatcgacccgatcacccacgccatcgtgcactccggcctgggggaatacagc
gtgctgacgctgctcatcctgctgctgatcgtggccggcatgttcctcgacggaatctcg
atcttcctcatcttcgtgccgctgatccagccggtcgccatggccttcggctgggacctg
gtgtggctgggcgtggtgctgacgctgatggtggcggtgggccagttcaccccgccggtg
gccgtcaacctgatggtgtccagcaagatcgcccggatcccgatggaaagcacggtgccc
tgggtgctgtggctggtgggcggcatgctctgcaccctggtgctggtcgtgatcttcccg
cagatcgcgctctggctgccgcattatctgggatactga
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