Castellaniella defragrans: BN940_01376
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Entry
BN940_01376 CDS
T03058
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, large permease component
KO
K11690
TRAP-type transport system large permease protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN940_01376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_01376
Transporters [BR:
cdn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BN940_01376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
CDM22752
UniProt:
W8X0I2
LinkDB
All DBs
Position
complement(290336..291616)
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AA seq
426 aa
AA seq
DB search
MDTTLIFLAVLFASMAIGIPIAVSLLVSGVALMWHLDFFNTQLLAQNLQAGFDNFPLLAV
PFFILAGELMNVGGLSQRIIDMARAFVGHIPGGLGYVAVFASVLLASMSGSAIADTAALA
TILLPMMRQQNYPMDYSTGLLASGGIIGPIIPPSLPFIIYGVTTNTSISKLFISGVVPGI
LMGGALLLAWRVVARRRQLPTAPRATRAERRRVVADSTWAIFMPVIILGGIRFGVFTPTE
AAVVAAVYAFLVSKFIYRALSWQATYDVLVASSITTAVVMFLCGAATVAAYMITLADLPN
QLAELFQPILAHPTLFMACMVVFLLLVGTSMDLTPIILIFAPVCLPLALKAHIDPIYFGF
MFVFTGCLGLITPPVGTVLNVAAGVGGVKMESVVKGVAPFLLVYALLLVLLVAFPQIVTA
PVRWLG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaccctgatcttcctcgccgtcctgttcgcctccatggcgatcggcatcccc
atcgccgtctccctgctggtctcgggcgtggccctgatgtggcacctggacttcttcaac
acccagctgctggcgcagaacctgcaggccggcttcgacaattttcccctgctggcggtg
cccttcttcatcctggcgggcgaactgatgaacgtgggcggcctgagccagcgcatcatc
gacatggcgcgcgccttcgtcggccacatcccgggcggcctgggctacgtcgccgtattc
gcctcggtgctgctcgcttcgatgagcggttcggccatcgccgacaccgccgcgctggcc
accatcctgctgcccatgatgcgccagcagaactacccgatggactacagcacgggcctg
ctggcctcgggcggcatcatcggtcccatcatcccgccgtcgctgcccttcatcatctac
ggcgtgaccaccaacacctcgatcagcaagctgttcatcagcggcgtggtccccggcatc
ctgatgggcggcgcgctgctgctggcctggcgcgtggtcgcgcgccgccgccagctgcct
acggccccgcgcgccacgcgggccgaacgccgccgcgtcgtggccgacagcacctgggcc
atcttcatgccggtcatcatcctgggcggcatccgcttcggcgtcttcacccccaccgag
gccgcggtggtggccgccgtctacgccttcctggtgtcgaagttcatctaccgcgcgctc
tcctggcaagccacctacgacgtgctggtggcctccagcatcaccacggcggtggtcatg
ttcctgtgcggcgccgcgaccgtggccgcctacatgatcaccctggccgacctgcccaac
cagttggccgagctgttccagcccatcctcgcgcaccccacgctgttcatggcctgcatg
gtggtcttcctgctgctggtgggcacgtccatggacctgacgcccatcattctgatcttc
gcccccgtctgcctgcccctggcgctgaaggcgcacatcgatccgatctatttcggcttc
atgttcgtgttcacgggctgcctgggcctgatcacgccgcccgtgggcaccgtgctcaac
gtcgccgccggcgtgggcggcgtgaagatggaatccgtcgtcaagggcgtcgcgcccttc
ctgctggtctatgcgctgctgctggtcctgctggtggcctttccccagatcgtcaccgcc
ccggtccgctggctgggctga
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