Castellaniella defragrans: BN940_01691
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Entry
BN940_01691 CDS
T03058
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN940_01691
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_01691
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN940_01691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDM22815
UniProt:
W8X8C1
LinkDB
All DBs
Position
364233..365816
Genome browser
AA seq
527 aa
AA seq
DB search
MQSRTFPARTCSGQPSDPRRRQVLLAGALGLPALGLMGGRAFAAAGQSVALAMIGEPQTL
DPMLTTADLVGTLMQHVYEPLYTFDSHWRIVPMLAAGMPTMQDGGRRVDIPVRQGVAFHD
GQPMKMSDVVASLKRWMAVSPRGKSVAAEVEAVEAASDTVLTLRMKAPYAPLPAQLALPT
SMAAIMPERTIAAQMTEFVGTGPYRLKERRPDQYTLLEKFDRYAARTEAPDGYGGRRIAH
IRELRFIPVPDANTRVEGVLSGQFAYADLLPVDAAGRLEKGGDQVVPLIGKNFGFPYLVF
NTKGTLATAALRQAAQAAIGAEELMAAAFGDPKFFSIGANFFPQGTPYYSLAGAQHYNVN
DPKLAADLAKKAGYAGKPIRILASRQYEFHYNLALVLAEQFKRAGLETDLQVVDWATLLQ
RRNDPALWDIYITHSGLFPEPMLSPPQLGANAPGWWESPEKKAALDAFNQEVDLARRGPL
WGAVQALIYEQVPFIELGKFNSLSARSARLQGYTPSAWPAFWNVKLA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcacgtacttttccggcccggacctgttccggccagccttccgacccccggcgg
cgccaggtgctgctggctggcgccctcggcctgccggccctgggcctgatgggcggccgg
gccttcgccgcggccggccagtcggtcgccctggccatgatcggcgagccgcagacgctc
gatcccatgctcaccaccgccgacctggtgggcaccctcatgcagcacgtctacgaaccc
ctgtacaccttcgattcgcactggcgcatcgtgccgatgctggcggcgggcatgcctacg
atgcaggacggcggccgccgggtcgatatcccggtccgccagggggtggcgttccacgac
ggccagccgatgaagatgagcgacgtggtggcctcgctgaagcgctggatggcggtgtcg
ccgcgcggcaagtccgtggcggccgaggtcgaggccgtcgaggccgcgtccgacaccgtc
ctgacgctgcggatgaaggcgccctacgcgccgctgccggcccagctcgcgctgcccacc
agcatggccgccatcatgcccgagcgcaccatcgccgcgcagatgacggaattcgtcggc
accggcccgtaccgcctgaaggaacgccgcccggaccagtacaccctgctggaaaaattc
gaccggtacgccgcgcgcaccgaggcgcccgacggctacggcggccgccgcatcgcccac
atccgcgaactgcgcttcatccccgtgccggacgccaacacgcgggtcgagggcgtgctc
tcgggccagttcgcctacgccgacctgctgcccgtggacgccgccggccggctggaaaag
ggcggcgaccaggtcgtgcccctgatcggcaagaacttcggctttccctatctggtgttc
aacaccaagggcacgctggccacggccgcgctgcgccaggccgcccaggccgccatcggc
gccgaggaactgatggccgccgccttcggcgaccccaagttcttcagcatcggcgccaat
ttcttcccgcagggcacgccgtactattcgctggccggcgcgcagcattacaacgtcaac
gaccccaagctcgccgccgatctggcgaagaaggccggctacgcgggcaagccgatccgc
atcctggccagccgccagtacgaattccactacaacctggcgctggtgctggcggagcag
ttcaagcgcgccgggctggagaccgacctgcaggtggtggactgggccacgctgctgcag
cgccgcaacgatcccgcgctctgggacatctacatcacgcactccggcctgttcccggag
cccatgctgtcgccgccgcaactgggcgcgaacgcgccgggctggtgggaaagcccggaa
aagaaggccgcgctcgacgccttcaaccaggaagtcgatctggccaggcgcgggccgctg
tggggcgcggtgcaggcgctgatctacgagcaggtgcccttcatcgagctgggcaagttc
aacagcctgtcggcgcgctccgcccggctgcagggctacacgcccagcgcctggcccgcc
ttctggaacgtgaagctggcctga
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