KEGG   Castellaniella defragrans: BN940_02001
Entry
BN940_02001       CDS       T03058                                 
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
cdn  Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdn03021]
    BN940_02001
Transcription machinery [BR:cdn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BN940_02001
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3
Other DBs
NCBI-ProteinID: CDM22876
UniProt: W8X1U9
LinkDB
Position
442337..443242
AA seq 301 aa
MTLSSSALSLAPSQLSLAISNPGALGTIDAYINAVNRLPMLSADQEADLGRRLRDHNDLD
AARDLVLSHLRLVVSIARQYLGYGLAHADLIQEGNIGLMKAVRRFDPDRGVRLVSFAVHW
IRAEIHEYVVRNWRLVKIATTKAQRKLFFNLRRMRPDGRSLGPEQVADIARELDVRPEDV
AEMEVRLSGGDCALDAPADEEDRYAPSDWLADEAQQPDRVLARRGMDALQGEGLEHALSS
LDARSQHIVRARWLADDGGATLHELADEYGISAERVRQIESAALKKLRIALSDRQADFEA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaccctctcttcgtccgccctgtcgctcgcgccgtcccagctctcgctggcgatctcc
aatcccggcgcgctcggcaccatcgatgcctacatcaacgccgtcaaccggctgccgatg
ctgtccgccgaccaggaagccgacctgggccgccgcctgcgcgaccacaacgacctggac
gccgcgcgcgacctggtcctgtcgcacctgcgtctggtggtctccatcgcccggcagtac
ctgggctacggcctggcgcacgcggatctgatccaggaaggcaacatcggcctgatgaag
gccgtgcgccgcttcgatcccgaccgcggagtgcgcctggtgtccttcgccgtgcactgg
atccgcgccgagatccacgaatacgtggtgcgcaactggcgcctggtcaagatcgccacc
accaaggcgcagcgcaagctgttcttcaacctgcgccgcatgcggcccgacggccgcagc
ctggggccggagcaggtcgccgacatcgcgcgcgagctcgacgtgcgccccgaggacgtc
gccgaaatggaagtccgcctctcgggcggcgactgcgccctggacgccccggccgacgag
gaagaccgctacgcgccgtccgactggctggccgacgaggcccagcagcccgaccgggtg
ctggcgcgccgcggcatggacgcgctgcagggcgagggcctggaacacgccctctcgtcc
ctggacgcgcgctcccagcacatcgtgcgcgcccgctggctggccgacgacggcggcgcc
acgctgcacgagctggccgacgaatacggcatctccgccgaacgggtccgccagatcgaa
tcggccgccctgaagaaactgcgcatcgccctgagcgaccgccaggcggacttcgaggcc
gcctga

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