Castellaniella defragrans: BN940_03831
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Entry
BN940_03831 CDS
T03058
Name
(GenBank) Hydrogen peroxide-inducible genes activator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdn03000
]
BN940_03831
Transcription factors [BR:
cdn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BN940_03831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
CDM23240
UniProt:
W8X8K6
LinkDB
All DBs
Position
complement(833511..834467)
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AA seq
318 aa
AA seq
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MDINQLNFKHLFYFWRVAKQGSLTHAAEQIHTSQSALSTQIRQLENRLGTPLFDRQGRHL
ELTATGQQVFAYAESIFGLGEQMLGWLEGRDEGATRVRVGSVSTMSRNFQVNWLRPLLRD
PTIVLSVDSGSLETLVERLLRHQLDVVLANEPVSSDPTRPTSSRFLGSQVISLVGRADRW
SGTALRVPEDLDGVEMAMPSVRHGVRLQFDALCFSAGVQPRLRAEIDDMTMLRLIARDSG
WITVLPEVVVQDELHSGELVHVGQSSQLTEHFYAITVRHGHLAGPLSRLLSREAAGDIFT
DASDPIQSTRTPSCSLDD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaaccagctcaacttcaagcacctgttctacttctggcgcgtggccaagcag
ggctccctcacgcacgcggccgagcagatccatacgtcccagtcggccctctccacccag
atacggcagctggaaaaccgcctgggcacgcccctgttcgaccgccagggccgccacctg
gagctcaccgcgacgggtcagcaggtcttcgcctacgccgaaagcatcttcgggctgggc
gaacagatgctcggctggctcgaaggccgcgacgagggcgcgacccgcgtgcgcgtgggc
agcgtctcgaccatgtcgcgcaacttccaggtcaactggctgcgccccctgctgcgggac
ccgacgatcgtgctgtcggtggattcgggttcgctggagacgctggtggaacgcctgctg
cgccaccagctggacgtggtgctggccaacgagccggtgtcgtccgaccccacccgcccc
acgtcctcgcgcttcctcggcagccaggtcatctcgctggtcggccgggccgaccgctgg
tcgggcaccgcgctgcgcgttccggaggacctggacggggtcgagatggccatgcccagc
gtgcgccacggcgtgcgcctgcagttcgacgccctgtgcttttcggccggggtgcagccg
cggctgcgcgccgagatcgacgacatgacgatgctgcgcctgatcgcgcgcgacagcggc
tggatcacggtgctgccggaagtggtcgtgcaggacgaactgcactcgggcgagctggtg
cacgtcggccagtcctcgcagctgaccgaacacttctacgccatcacggtgcgccacggc
cacctggcgggcccgctcagccggctgctgtcgcgcgaggcggccggggacatcttcacc
gacgcatccgaccccattcaatccacaaggaccccatcgtgctccctcgacgactga
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