Castellaniella defragrans: BN940_03856
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Entry
BN940_03856 CDS
T03058
Name
(GenBank) ABC transporter, permease protein
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN940_03856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_03856
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN940_03856
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CDM23245
UniProt:
W8X8K7
LinkDB
All DBs
Position
complement(841423..842322)
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AA seq
299 aa
AA seq
DB search
MIMDTANTLPTSRTGLPASAAPSRRWGWLWRATIWTVMGFFLLNVVFMIATVVVNSVATR
WFGTPLPEGFTLSWYGRAWDDFQLAHVLVVTLEVVAATVLLSILLGVPAAYALARAQFRG
KRLAMLLILLPMMVPPVTYGIPMATAMYQLGVGGTLTGVILSNLVPALPFVILVMTPFIE
QIDPGLESAARIFGANTYQYFRHVLLPLLVPGMLAAGLLVLVRTIGMFELTFFTAGPDSQ
TLVVALYYAVFSTGVRAPQAIDAMAMIYMAITLLWVLIALRFVSPTQLVSRVKEAPREA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggataccgccaacacactcccgacttcccggaccggcctgcccgcctccgcc
gcgccctcgcggcgctggggctggctgtggcgcgccacgatctggaccgtcatgggcttc
ttcctgctcaacgtcgtcttcatgatcgccaccgtggtggtcaactcggtggcgacgcgc
tggttcggcacgcccctgcccgaaggcttcacgctgtcctggtacggccgcgcctgggac
gacttccagctcgcgcacgtcctggtggtgacgctggaagtcgtcgccgccacggtcctg
ctgtcgatcctgctgggcgtgcccgccgcctacgcgctggcccgcgcccagttccgcggc
aagcgcctggccatgctgctgatcctgctgcccatgatggtgccgccggtcacctacggc
atccccatggccacggcgatgtaccagctcggcgtcggcggcacgctgacgggcgtcatc
ctgtccaacctggtgcccgccctgcccttcgtgatcttggtgatgacgcccttcatcgag
cagatcgaccccggcctggaatcggccgcgcgcatcttcggcgccaacacctaccagtat
ttccgccacgtgctgctgcccctgctggtgccgggcatgctggcggcgggcctgctggtg
ctggtgcgcaccatcggcatgttcgagctgaccttcttcacggcggggccggattcccag
accctggtggtggcgctgtactacgcggtgttctccaccggcgtgcgcgcgccgcaggcg
atcgacgcgatggcgatgatctacatggccatcaccctgctgtgggtcctgatcgccctg
cgcttcgtcagcccgacgcagctcgtcagccgcgtcaaggaagcaccccgcgaggcatga
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