KEGG   Castellaniella defragrans: BN940_04051
Entry
BN940_04051       CDS       T03058                                 
Name
(GenBank) Type III secretion inner membrane protein YscD
  KO
K03220  type III secretion protein D
Organism
cdn  Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cdn02044]
    BN940_04051
Secretion system [BR:cdn02044]
 Type III secretion system
  Type III secretion core apparatus
   BN940_04051
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd
Other DBs
NCBI-ProteinID: CDM23284
UniProt: W8WUQ7
LinkDB
Position
complement(886912..888267)
AA seq 451 aa
MSATFELRVLSGLHREARCPAAHGNLVGADPECDIVLADAGLPARAARLVLGAEGWNLMP
GENEPGPDAPAGTPYSQPLPLGPVWLTVARPGDPWMLPETADEAAGEADPAPIGMQQPGP
DEDHTSLADPGDDAGQAGPGARAERTDGIAAPSPRGRSWPMILGLTAAGLAIVVALLLAW
LLPAAPSAPQRPDPRIAAEQSLPRIQAALERLGLASRLRASLAAGSATAQVSGWVRDAAE
RDALAAALAQIWPMPGMQVSVEADAVRMARTVLQGYAVKYEPRYDGDGRLSVLGIASDEA
ERTAAVEAVRAQLPGMTIMGNDIQPAAAVADALTRELAAAGLSGVTLTWDRHHLRTDSSD
LDDAQLARFEDILAEFNRRHFDVAALPDADRPAADTVPFGILSVVSGKTPFIVLEDGSKL
LVGGTYRHYRLIGIEERRLIFDGPRPAIILR
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagcgcgacgttcgaactgcgcgtgctttcgggcctgcaccgcgaagcgcgctgcccg
gccgcccacggcaacctggtgggcgcggatccggaatgcgacatcgtcctggccgatgcc
ggcctgccggcgcgtgccgcccgcctggtcctgggtgccgaaggctggaacctgatgcct
ggcgaaaacgagcccggaccggatgcgccggccggcacgccctacagccagccgctgccg
ctgggtcccgtctggctcacggtggcccgccccggggatccctggatgctgcccgagacc
gcggatgaagccgcaggcgaagccgaccccgcacccatcggcatgcagcaacccggcccg
gacgaagaccatacatccctggccgatccgggcgacgatgccgggcaggccgggcccggc
gcccgtgcggagcgtaccgacggcatcgccgcgccatccccgcggggcagatcctggccc
atgatcctggggctgaccgccgccggcctggctatcgtcgtggcactgctcctggcctgg
ctgctgccggccgcaccatccgctccccagcggcccgatccgcgcatcgccgcggaacag
tcgctgccccgcatccaggctgcgctggaacgcctgggcctggcttcgcgcctgcgggcg
tccctggcagccggcagcgccacggcacaagtgtcgggctgggtgcgcgatgccgccgaa
cgcgatgcactggccgccgcgctggcgcagatctggcccatgccgggcatgcaggtcagc
gtcgaggcggacgcggtccggatggcccggaccgtgctgcaaggctacgcggtgaaatac
gagccccgctacgatggcgatggccgcctcagcgtcctgggcatcgcatccgacgaagca
gagcgcacagcggccgtcgaggcagtgcgcgcgcaactgccgggcatgaccatcatgggc
aacgacatccagccggcggcggccgtggccgacgccctgacccgggagctggcggcggct
gggctgagcggcgtcacgctgacctgggaccgccaccacctgcgcaccgattcatccgac
ctggacgacgcccagctggccagattcgaggacatcctggcggaattcaaccgccgccac
ttcgacgtcgccgcgttgcccgacgccgaccgccccgccgctgacaccgtgcccttcggc
atcctcagcgtggtcagcgggaagacaccctttatcgtgctggaagatgggagtaaattg
ctcgtaggcggcacctaccggcattaccgcctgatcggcatcgaggaacggcgcctgatc
ttcgacggcccgcgccccgcgatcatattgcgctga

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