Castellaniella defragrans: BN940_04371
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Entry
BN940_04371 CDS
T03058
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn03030
DNA replication
cdn03430
Mismatch repair
cdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN940_04371
03430 Mismatch repair
BN940_04371
03440 Homologous recombination
BN940_04371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdn03032
]
BN940_04371
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_04371
Enzymes [BR:
cdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN940_04371
DNA replication proteins [BR:
cdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN940_04371
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN940_04371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_18
AAA_2
AAA_5
AAA_30
TsaE
nSTAND3
Adeno_E1B_55K_N
AAA_19
AAA_28
Mg_chelatase
Herpes_Helicase
PIF1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CDM23347
UniProt:
W8X228
LinkDB
All DBs
Position
945144..946721
Genome browser
AA seq
525 aa
AA seq
DB search
MARKWRPRSFDTLIGQDHVVRALTHALSSGRLHHAWLFTGTRGVGKTTLSRILAKSLNCV
QGVTATPCGHCQACTEIDAGRYVDYIELDAASNRGVDEMTQLLEQAVYAPSSGRFKVYMI
DEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMTVPAIVD
HLQDILAQESVPADPQGLRLIAQAASGSMRDALSLTDQAISFSAGNLTAAAVGEMLGTLD
QRHLLDLLRALAAADAPGILAVADDLAARGLSFQAALGDLAVLLSRVAIAQRLGHAQADD
PLAEDVTALAGVLTPDDVQLFYAVAVHSRQELALAPDEQAGFIMACLRMLALLPEGRVPP
VVMSSPPTAGAEARPAAAPDAAAPVPVEAAVPAPAAPASAEAAVSVPAASAPAGTAAPRY
SPEPAPVAARAAHAAPAAAPSAWAPAPAPVPAAPVPPVPAQAASAAALAETPAWEAAPPG
SRSRRPIPIRRPTATRSRTPIRRRPRRRTRPHPPRTTGRTPSPTT
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgcaaatggcgcccccgttcattcgatacgctgatcggccaggatcacgtggtg
cgtgccctgacccatgcgctgtcgtccggccggctgcaccacgcctggctgttcaccggc
acgcgcggcgtgggcaagaccaccctgtcgcgcatcctcgccaaatccctgaactgcgtc
cagggcgtcaccgcgacgccctgcggccattgccaggcctgcacggagatcgacgcgggc
cgctacgtggactacatcgagctcgacgccgcctcgaaccggggcgtcgacgaaatgacc
cagctgctggaacaggcggtctacgcgccgtcgtccggccgcttcaaggtctacatgatc
gacgaagtccacatgctgaccgggcatgcgttcaacgccatgctcaagacgctcgaagag
ccgcccgagcatgtcaagttcatcctggcgaccaccgatccgcagaagatcccggtgacg
gtgctgtcgcgctgcctgcagttcaacctgaagcagatgacggtgcccgccatcgtcgac
cacctgcaggacatcctggcgcaggaatccgtgccggccgacccccaggggctgcgcctg
atcgcccaggcggcgtccggctcgatgcgcgacgccctgtcgctcacggaccaggccatc
tcgttctcggcgggcaacctcaccgccgccgccgtgggcgagatgctcggcaccctggac
cagcgccatctgctggacctgctgcgggcgctggccgcggccgacgcgcccggcatcctg
gccgtggccgacgacctggccgcgcgcggcctgtcgttccaggcggccctgggcgacctg
gccgtcctgctgtcgcgggtggccatcgcccagcgcctgggccatgcccaggccgacgat
cccctggccgaagacgtcaccgccctcgccggcgtcctgacgccggacgacgtgcaactg
ttctacgccgtggcggtgcacagccgccaggaactcgccctggcgcccgacgagcaggcg
ggcttcatcatggcctgcctgcgcatgctggccctgctgccggaaggccgcgtgccgccc
gtggtgatgagctcgccgccgacggccggcgcggaggcccgtccggccgccgcgcccgac
gcggcggcgcccgtccccgtcgaagccgccgtgcctgcgcctgcagcgcccgcgtccgct
gaagccgccgtgtccgtgcccgcagcgtccgcgcccgccggaaccgccgcgcccaggtat
tcgcccgagcccgcgccggtcgcagcccgggccgcccatgccgcccccgccgccgcgccg
tccgcgtgggcgcctgcaccggcccccgttcccgccgcacccgtgccgccggtcccggcc
caggccgcttccgccgccgcactcgccgagactcccgcctgggaggccgcgccccccggc
agccgatcccgtcgcccgatcccgatccggcgcccgaccgcgacccgatcccggaccccg
atccggcgccgcccgcgccgccggacgaggccgcatccgcctcggacgactggacggacg
ccgtccccgacgacctga
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