Castellaniella defragrans: BN940_04706
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Entry
BN940_04706 CDS
T03058
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cdn
Castellaniella defragrans
Pathway
cdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BN940_04706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_04706
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BN940_04706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
PEX14-like_2nd
Motif
Other DBs
NCBI-ProteinID:
CDM23411
UniProt:
W8X2V1
LinkDB
All DBs
Position
complement(1015527..1018091)
Genome browser
AA seq
854 aa
AA seq
DB search
MMQQYLQLKAQAGSHLLFYRMGDFYEMFYDDAERGARLLNLTLTKRGTSNGAPIPMAGVP
HHAMESYLARLVAMGESIAICEQIGDPGASKGPVERRIVRVVTPGTLTDDALLPADDDRR
IAALITGRGHGRETVGLAWMNLANGDFKACESTSELLDAELGRIAPAELVCAEQADTGAL
EACGLDAAISRVPDWHFEADGARDTLLRHFGVNDVGAFGLDHLPLATRAAGALLRYVGAT
QAQALNHVHSLAVDAGGDYVVLDPATRRNLEITDTLNGGDGPTLFSTLDHARTPMGSRQL
RRWLQAPLRDNPQARARQDVITQFLRAPDADGALRALRDALRPLPDLERMATRLALGTIR
PRELASLREALAGLDALAQATASAFDARGLLADCLRDVPVDPALHALLARGIAAEPAPMV
RDGGVIAPGYDAELDELRQLAGDNGAFLLEVEARERERTGIANLRVEYNRVHGFFIEVTR
GQADKVPDDYRRRQTLKNAERYITPELKAWEDKVLSARDRGLAREKLLYERILAQAAEHA
SALARSAAALARIDALAGLAHHARAHGWVAPELSDDVCLDIQAGRHPVVEHSIESFTPND
CRMDEERRMLLITGPNMGGKSTYMRQVALIALLARAGSYVPAARARIGPVDRIFTRIGAA
DDLAGGRSTFMMEMMEAGVILGAATPRSLVLMDEIGRGTSTYDGLALAWAIAHRLLTHNR
ALTLFATHYFEMTRLPETAHGVVNVHLAAADAPDGVVFLHEVRPGPASQSYGLHVAQRAG
IPPVVIRHARKELAELEARNRAGSQLALFVQQAEDESGGDPDAPLRAALQALEPDSLSPR
EALELIYQLRRDFL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtacctccagctcaaggcccaggccgggtcgcatctgctgttctatcgc
atgggcgacttctacgagatgttctacgacgacgcggaacgcggggcgcggctgctgaac
ctgacgctgaccaagcgcggcacgtccaacggcgcgccgatcccgatggcgggcgtgccg
caccatgccatggaaagctacctggcgcggctggtggcgatgggtgaatccatcgccatc
tgcgagcagatcggcgacccgggcgccagcaaggggccggtcgaacgccggatcgtgcgg
gtggtgacgcccggcacgctgaccgacgacgcgctgctgccggccgacgacgaccgccgg
atcgcggccctgatcacggggcgcggccacgggcgcgagaccgtgggcctggcctggatg
aacctggccaacggcgacttcaaggcctgcgaatcgacatcggaactgctggacgcggaa
ctgggccgcatcgcgcccgccgagctggtctgcgcggaacaggcggacaccggggcgctg
gaggcctgcggcctggacgcggcgatcagccgggtgccggactggcacttcgaggccgac
ggcgcgcgcgacacgctgctgcgccatttcggcgtgaacgacgtgggcgccttcggactg
gaccacctgccgctggcgacgcgggcggcgggcgcgctgctgcgctacgtcggggcgacg
caggcccaggcgctcaaccatgtgcacagcctggcggtggacgcgggcggcgactacgtg
gtgctggacccggccacgcggcgcaacctggaaatcacggacacgctgaacggcggcgac
ggtccgacgctgttcagcacactggaccacgcccgcacgcccatgggcagccgtcagctg
cgccgctggctgcaggcgccgctgcgcgacaacccgcaggcgcgcgcccgacaggacgtg
atcacgcagttcctgcgggcgccggacgccgatggcgcgctgcgcgccctgcgcgacgcg
ctgcggccgctgcccgacctggagcgcatggcgacccgcctggcgctgggcacgatccgc
ccgcgcgaactcgccagcctgcgcgaggcgctggcggggctggacgcgctggcgcaggcc
accgcatccgccttcgacgcccgggggctgctggccgactgcctgcgcgacgtgcccgtg
gacccggcgctgcacgcgctgctggcgcggggcatcgccgccgaacccgccccgatggtg
cgcgacggcggggtgatcgccccgggctacgatgccgaactggatgaactgcgccagctg
gcgggcgacaacggcgccttcctgctggaagtcgaggcccgcgagcgggagcgcaccggc
atcgccaacctgcgggtggaatacaaccgcgttcacggcttcttcatcgaggtcacgcgc
ggccaggccgacaaggtgcccgacgactaccgccgccgccagacgctgaagaacgccgag
cgctacatcacgcccgaactgaaggcctgggaggacaaggtgctgtcggcccgggaccgc
ggcctggcgcgcgagaaactgctgtacgagcggatcctggcgcaggcggcggagcacgcc
tcggccctggcgcgcagtgccgccgccctggcgcggatcgacgcgctggccgggctggcc
caccacgcgcgcgcccacggctgggtggcgccggagctgtccgacgacgtctgcctggac
atccaggcgggccgccatccggtggtggaacacagcatcgagtccttcaccccgaacgac
tgccgcatggacgaagagcgccgcatgctgctcatcacggggccgaacatgggcggcaag
tccacctacatgcgccaggtggcgctgatcgcgctgctggcgcgcgccggcagctacgtg
cccgccgcgcgggcgcgcatcggtccggtggaccgcatcttcacgcgcatcggcgcggcc
gacgacctggcgggcgggcgctcgaccttcatgatggagatgatggaggcgggcgtgatc
ctgggggcggccacgccgcgcagcctggtgctgatggacgagatcggccggggcacgtcc
acctacgacggcctggcgctggcctgggcgatcgcccaccggctgctgacgcacaaccgc
gccctgacgctgttcgccacgcactatttcgagatgacccggctgccggagacggcccac
ggggtggtcaacgtccacctggcggcggccgacgcgcccgacggcgtggtcttcctgcac
gaggtgcgcccggggccggccagccagagctacggcctgcacgtggcccagcgcgcgggc
atcccgccggtggtgatccgccacgcgcgcaaggaactggccgaactggaggcccgcaac
cgggcgggttcccagctggcgctgttcgtgcagcaggccgaggacgagtccggcggcgac
ccggacgcaccgctgcgcgccgccttgcaggcgctggagcccgacagcctcagcccgcgc
gaggcgctggagctgatctaccagctgcgccgcgactttctctga
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