Castellaniella defragrans: BN940_05106
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Entry
BN940_05106 CDS
T03058
Name
(GenBank) Phosphogluconate repressor HexR, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdn03000
]
BN940_05106
Transcription factors [BR:
cdn03000
]
Prokaryotic type
Helix-turn-helix
Other families
BN940_05106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_IclR
RWP-RK
HTH_5
LacI
HTH_AsnC-type
HTH_24
TetR_N
Motif
Other DBs
NCBI-ProteinID:
CDM23490
UniProt:
W8X8Q6
LinkDB
All DBs
Position
complement(1099661..1100506)
Genome browser
AA seq
281 aa
AA seq
DB search
MNTSILPELRARLPRLSRAAARVARLALAQPGEVARMTIGEIARAAEVSEPTVIRFCRAL
GHAGWPDFKVRLAASLMAGVPYVHSSLRPDESVAGLTGKVFDNAVSALLRVRDALDPAAL
EAAIDLLARARRIEFYGVGNSGIVAADAQHKFFRYDLAVAAYADSHIQAMAASLLGPADA
LVAISHSGRSRELLEAAGLARANGCPLVAITASGTPLAELATLHLRADTQEDTALYSPMI
SRLAHLAIIDVLALGVALRRGDQASRVLEKTKKSLLGKRRP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatccatcctgcccgagctgcgcgcccgcctgcccaggctgagccgcgccgcc
gcccgcgtcgcgcgcctggcgctcgcccagcccggcgaggtcgcgcgcatgaccatcggc
gagatcgcccgggcggccgaagtcagcgagcccacggtcatccgcttctgccgcgcgctg
ggccatgcgggatggccggatttcaaggtcaggctggccgccagcctgatggccggggtg
ccctacgtgcattcctcgctgcggcccgacgaaagcgtggccggcctgaccggcaaggtc
ttcgacaacgccgtctcggcgctgctgcgcgtgcgcgacgcgctcgaccccgccgcgctc
gaagcggccatcgacctgctggcgcgggcgcgccgcatcgagttctacggcgtgggcaat
tccggcatcgtcgccgccgacgcgcagcacaagttcttccgctacgacctggcggtcgcc
gcctatgccgacagccacatccaggccatggcggcctcgctgctgggtccggccgacgcg
ctggtagccatctcgcactcgggccgctcgcgcgaactgctcgaagccgccggcctggcg
cgggccaacggctgccccctcgtcgccatcaccgcctcgggcacgcccctggccgaactg
gcgacgctgcacctgcgcgccgacacccaggaggacaccgcgctctacagccccatgatc
tcgcggctggcgcacctggcgatcatcgacgtgctggccctgggcgtggccctgcggcgc
ggcgaccaggccagccgggtgctggaaaagaccaagaaaagcctgctcggcaagcgccgg
ccgtaa
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