Castellaniella defragrans: BN940_05471
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Entry
BN940_05471 CDS
T03058
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdn03019
]
BN940_05471
03009 Ribosome biogenesis [BR:
cdn03009
]
BN940_05471
03036 Chromosome and associated proteins [BR:
cdn03036
]
BN940_05471
Enzymes [BR:
cdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BN940_05471
Messenger RNA biogenesis [BR:
cdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN940_05471
Ribosome biogenesis [BR:
cdn03009
]
Eukaryotic type
90S particles
RNase
BN940_05471
Prokaryotic type
rRNA processing factors
BN940_05471
Chromosome and associated proteins [BR:
cdn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BN940_05471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CDM23563
UniProt:
W8WV36
LinkDB
All DBs
Position
1173816..1174688
Genome browser
AA seq
290 aa
AA seq
DB search
MMASLESLQSALDYRFRDARLLERALTHRSHGMPHNERLEFLGDSVLNFVVSTLLFAEHA
EMDEGDLSRVRSNLVKQSALADIAQNLSLSAHLRLGEGELKSGGFRRPSILADALEALFG
AVYLDGGYPEISRVIERLYRPILAHIDLRTFGKDPKTLLQELVQGRGHPLPRYEVVATRG
AAHDQLFDVVCEIAPLGIRAQASGSSRRAAEQAAAGQAIAAIESLGPVRRAARRRKPAQL
SLPVAVAQDGARDPLPGQDPAPAPKQVQTQAQEQVQTQARARGQTQDQKT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgatggcctccctggaatccctgcagtccgccctggactaccgcttccgcgacgcgcgc
ctgctggaacgcgccctgacccatcgcagccacggcatgccgcacaacgagcgcctggaa
ttcctgggggattcggtcctgaatttcgtcgtctccacgctgctgttcgccgagcacgcc
gaaatggacgagggcgacctgtcgcgggtgcgctccaatctggtcaagcagtccgccctg
gccgacatcgcccagaacctgtccctgtcggcccacctgcgcctgggcgagggcgagctc
aagagcgggggctttcgccggccctcgatcctggccgatgcgctcgaagccctcttcggc
gccgtctacctggacggcggctatcccgagatcagccgcgtcatcgagcgcctgtaccgc
ccgatcctcgcgcacatcgacctgcgcaccttcggcaaggatcccaagaccctgctgcag
gagctcgtccaggggcgcggccatccgctgccgcgctacgaggtcgtcgccacccggggg
gcggcgcacgaccagctcttcgacgtggtctgcgagatcgccccgctcggcatccgggcg
caggcctcgggcagcagccggcgggcggccgagcaggccgccgccggccaggcgatcgcc
gccatcgaatccctggggccggtgcgccgggcggcgcgccgccgcaagccggcccagctg
tccctgcccgtggccgtggcgcaggacggagcccgggatccgctcccgggccaggacccg
gccccggccccgaaacaggttcagacccaggcccaggaacaggtccagacccaggcacgg
gcgcggggccagactcaggaccagaagacatga
DBGET
integrated database retrieval system
