Castellaniella defragrans: BN940_05506
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Entry
BN940_05506 CDS
T03058
Name
(GenBank) hypothetical protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
cdn
Castellaniella defragrans
Pathway
cdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN940_05506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_05506
Transporters [BR:
cdn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
BN940_05506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
CDM23570
UniProt:
W8X8S2
LinkDB
All DBs
Position
1179932..1181143
Genome browser
AA seq
403 aa
AA seq
DB search
MQGCRRRCAKFHSFSLGPVDSGIRRSIIPHFSMTLFKRAVFSEITSHAGIVFSTLLVVWL
SVLIVRLLGEAANGDIGANVVLGLAAFSSITALPVILSVSLFVAVLTTVTRSYRESEMAV
WFASGLSLAQWLRPVMRFALPVAAVVAVLTLSASPWAYGQIAEYRQRFEQRSDLSKVSAG
QFIETDDGRRVFFAESPVRPDDELGRVVARIIEPEWLSVVTAESAAIRTEPNGDRFLVLG
PGHRYDLKPGSPEMRLLNFDRYGVRIESRSDPGALEARRQEALQQIKARPTLDLIAQGDA
ESLSQLMWRLSLPLAVLNLALIALPLGAVNPRLGRSGDLLIAGLLALLYMNLINLSRGWI
ANGVLSFGVGLWLVHAAFLALGLGLMWRRLRMPRPRRRRARAA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggatgccgacgtcgttgtgctaaattccattcgttttccttgggtccggtggat
tcggggatcagacggtccattattccgcatttttccatgacattgttcaagcgcgccgtc
ttttccgagatcaccagccatgcgggcatcgtgttttccaccctgctggtggtgtggctg
agcgtgctgatcgtgcgcctgctgggcgaggccgccaacggcgacatcggcgccaacgtg
gtgctgggcctggcggccttctccagcatcaccgcgctgccggtgatcctgtcggtgtcc
ctgttcgtggcggtgctgaccaccgtcacgcgcagctaccgcgagtcggagatggccgtc
tggttcgccagcggcctgtcgctggcccagtggctgcgtccggtgatgcgcttcgccctg
ccggtggcagccgtggtggcggtgctgaccctgtccgcctcgccctgggcctacggccag
atcgccgaataccgccagcgcttcgagcagcgctcggacctgtccaaggtctcggccggc
cagttcatcgagaccgacgacgggcgccgggtcttcttcgccgaatcgcccgtccggccg
gacgacgagctgggccgggtggtggcgcgcatcatcgagcccgaatggctcagcgtggtt
acggccgaaagcgccgccatccgcaccgagcccaacggcgaccgcttcctggtgctgggg
ccgggccatcgctacgatctcaagcccggttcgcccgagatgcggctgctgaacttcgac
cgctacggcgtgcgcatcgaaagccgcagcgatcccggcgcgctggaagcccggcgccag
gaggccctgcagcagatcaaggcgcgcccgaccctggacctgatcgcccagggcgacgcc
gaatccctgtcgcagctgatgtggcgcctgtcgctgccgctggcggtgctgaacctggcg
ctcatcgccctgccgctgggggcggtgaatccgcgcctggggcgctcgggcgacctgctg
atcgccggcctgctggcgctgctgtacatgaacctcatcaatctgtcgcgcggctggatc
gccaacggcgtgctgtcgttcggcgtcggcctgtggctggtgcacgccgccttcctggcc
ctgggcctggggctgatgtggcggcgcctgcgcatgcctcggcccaggcggcgcagggcc
cgggcggcctga
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