Castellaniella defragrans: BN940_06051
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Entry
BN940_06051 CDS
T03058
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN940_06051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdn03019
]
BN940_06051
03110 Chaperones and folding catalysts [BR:
cdn03110
]
BN940_06051
03029 Mitochondrial biogenesis [BR:
cdn03029
]
BN940_06051
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cdn04147
]
BN940_06051
Enzymes [BR:
cdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN940_06051
Messenger RNA biogenesis [BR:
cdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN940_06051
Chaperones and folding catalysts [BR:
cdn03110
]
Heat shock proteins
HSP60 / Chaperonin
BN940_06051
Mitochondrial biogenesis [BR:
cdn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN940_06051
Exosome [BR:
cdn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN940_06051
Exosomal proteins of other body fluids (saliva and urine)
BN940_06051
Exosomal proteins of breast cancer cells
BN940_06051
Exosomal proteins of colorectal cancer cells
BN940_06051
Exosomal proteins of bladder cancer cells
BN940_06051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
CDM23679
UniProt:
W8WVW6
LinkDB
All DBs
Position
complement(1300266..1301885)
Genome browser
AA seq
539 aa
AA seq
DB search
MSAKEVLFHDSARERVVKGVNILANAVRVTLGPKGRNVLLERSFGAPVITKDGVSVAKEI
ELEDKFENIGAQVVKQVASKTADVAGDGTTTATVLAQAIVQGGLKYVAAGINPMDLKRGI
DQAVGTVVGELKSLSKPISTSKEISQVAALSANSDPSVGKIIADAMDKVGKEGVITVEDG
KSLDNELEVVEGMQFDRGYLSPYFITDPEKQVAVLEDPLVLLHDKKISSIRDLLPVLEAA
AKAGKPLLIVAEDVEGDALATLVVNTMRGVLKVAAVKAPGFGDRRKAMLEDIAILTGATL
ISEETGKQLDKAGLADLGGAKRIEVHKENTIIVGGAGKQDRIDGRIKAIQAQIEQATSDY
DREKLQERVAKLSGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RAGKALARLKGANSDQDAGIQLVARAIEEPLRAIAANAGDEPSVVIAKVAAAEGNFGYDA
ASGQYGDLVELGVVDPTKVTRTALQNAASIASLILTTEACVGELPRKDKVPAAAGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaagaagtgcttttccatgacagcgcccgcgagcgcgtggtcaagggcgtg
aacattctggccaacgccgtgcgcgtgacgctgggccccaagggacgcaatgtgctgctc
gaacgcagcttcggcgccccggtcatcaccaaggacggcgtgtcggtcgccaaggaaatc
gaactggaggacaagttcgagaacatcggcgcgcaggtcgtcaagcaggtcgcctccaag
accgccgacgtggcgggggacggcaccaccaccgcgacggtcctcgcccaggccatcgtg
cagggcggcctgaagtacgtggcggcgggcatcaacccgatggacctgaagcgcggcatc
gaccaggccgtgggcaccgtggtcggcgagctcaagtccctgtccaagccgatctccacc
agcaaggagatctcgcaggtggcggccctgtcggccaattccgacccgtccgtcggcaag
atcatcgccgacgccatggacaaggtcggcaaggaaggcgtgatcacggtcgaggacggc
aagtcgctggacaacgagctcgaagtggtcgagggcatgcagttcgaccgcggctacctc
agtccctatttcatcaccgaccccgagaagcaggtggcggtcctggaagacccgctggtg
ctgctgcacgacaagaagatctccagcatccgcgacctgctgccggtgctggaagccgcc
gccaaggccggcaagccgctgctgatcgtggccgaggacgtcgagggcgacgcgctcgcc
accctggtggtcaacacgatgcgcggcgtgctgaaggtggccgccgtcaaggcgccgggc
ttcggcgaccgccgcaaggccatgctggaggacatcgccatcctcaccggcgcgacgctg
atttccgaggaaaccggcaagcagctcgacaaagccgggctggccgacctgggcggcgcc
aagcgcatcgaggtgcacaaggaaaacacgatcatcgtgggcggcgccggcaagcaggac
cgcatcgacggccgcatcaaggccatccaggcgcagatcgagcaggccaccagcgactat
gaccgcgagaagctgcaggagcgcgtggccaagctgtcgggcggcgtggcggtgatcaag
gtcggcgccgcgaccgaggtcgagatgaaggaaaagaaggaccgcgtcgacgatgcgctg
cacgcgacccgcgcggccgtcgaggaaggcatcgtgcccggcggcggcgtggcgctgctg
cgcgccggcaaggcgctcgcccggctcaagggggccaacagcgaccaggacgcgggcatc
cagctcgtggcccgggcgatcgaagagcccctgcgcgccatcgcggccaatgcgggcgac
gagccctcggtcgtgatcgccaaggtggcggccgcggaaggaaacttcggctacgacgcg
gccagcggccagtacggcgacctggtcgagctcggcgtcgtggatcccaccaaggtgacc
cgcaccgccctgcagaacgccgcctcgatcgccagcctcatcctgaccaccgaggcctgc
gtgggcgaactgcccaggaaggacaaagtcccggccgccgcgggcggcatggacttctga
DBGET
integrated database retrieval system
