Castellaniella defragrans: BN940_06381
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Entry
BN940_06381 CDS
T03058
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
cdn
Castellaniella defragrans
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Helicase_C
DEAD
SLFN-g3_helicase
DUF7340
DUF8260
AAA_30
DUF8106
nSTAND_NTPase5
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
CDM23744
UniProt:
W8WW14
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All DBs
Position
complement(1361441..1363720)
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AA seq
759 aa
AA seq
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MSLDLETTAVEAAPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQA
HRQLVVASLKRKLFPAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAE
GYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKLIKLREQLNVQPTGQEFFV
LGRVRMRMGFHWKPVFTQRRTRHGNVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHE
FINLMDGNGELVFSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLCIADEA
HEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFYLLFRALPGRMIEDGYRPTT
SGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTARGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVV
LNVLLAWPDCCFRSETVVHPRTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVL
AYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRREDWIAEQLDRGIDVLITNPELV
KTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgatctcgaaaccactgccgttgaagccgcgcccgtacagggcgaactgctc
gatgcggaatcttcccctctgaccctgagccttcaggatttcgtcggcgagttcggcgac
gaactgctcgacgccctcaatagcgccaacccgccggtctataacggccagccgcaggcg
caccggcaactcgtcgtcgccagcctcaagcgcaagctgttcccggcccaggccgaagtc
gtccacgccgccgccgagctgctgatcgaccgtggcgaacgcgccgcgatcgtcaatggc
gaaatgggctgcggcaagacgaccgtcggcatcgccacggccgctgtgctcaacgccgaa
ggctaccgccgcaccctggttctttcgccgccgcaccttgtttacaagtggcggcgcgag
atccaggagacggtggcaggcgccaaggtgtgggtgctcaacgggccggacacgctcgtc
aagctcatcaagctgcgcgagcagttgaatgtccagcccacgggccaggagttctttgtc
ttgggccgggtcaggatgcggatggggttccactggaagcccgtcttcacccagcggcgt
acccgtcacggcaacgtggcggcgtgcccggactgcggcacggtcatcaccgacctcgac
ggcgagccggtcaacccggtcgcgctccaagccgaggaataccgcaggaagtgcagccat
tgcgccgcccccctgtggacactgatccgcccgcgcagcctgtccggcagcgaccagtcc
tcggccgtgctgaaagccttgaagcgcatcccgacgatcggggaagtcactgcgcagaag
ctgatgcagaagttcggcgacgggttcttggcgtcgatgctgggcgacaacatccacgag
ttcatcaacttgatggatggcaacggcgaactggtcttctctgaccgccaggcgcatcgc
atggaaagagcgatggcgaacatggagttcggctttggcgaaggcggctaccagccgtcc
gagttcatcaagcgctatctgccgcaaggcacgttcgacttgtgcatcgcggacgaggcg
cacgagtacaagaacggtggcagtgcccagggtcaggctatgggcgtgctggcggcgaag
gctcgcaagaccttgctgctgacaggcacgctgatgggcggctacggggacgacctgttc
tacctgctgttccgagccctgcctgggcggatgatcgaagacggctaccgcccgaccacg
agcggcagcatgacctcggcggccatggcgttcatgagggaccacggggtcctcaaggac
atctactccgaaagcaccggcacggcgcacaagacggccaggggcaccaaggtatcggtg
cgcacggtcaaggctcccggcttcgggccaaagggggtcttgcggtgcatcctgccgttc
acgatcttcctcaagctcaaggacatcggcggcaacgtcctgccgccgtatgacgaggag
ttccgcgaagtcgcaatggacacggcgcaagccgcggcctaccgcgacctggcgggtcgg
ctgaccgcagagctgaaacaggctctggcgcgacgcgatacgacgctgctgggtgtggtg
ctcaacgtgctgctggcctggccggactgctgcttccggtcggaaaccgtagtgcatccg
cgcacgcgcaacaccttggcgttcgtcccggctcagttcaacgagttcgaggtgacgccg
aaagagcgcgagctgatcgacatctgcaaggaagagaaggcgcagggccgcaaggttctg
gcctacacggtctataccggcacgcgcgacaccacgtcgcgcttgaaggtattgctggag
caagaaggctttcgggtggcggtgctgcgcgcaagcgtggacgccagccgccgcgaggac
tggatcgccgagcaactggaccgtggcatcgacgtgctcatcaccaaccccgagctggtc
aagacgggcttggacctgttggacttcccgacgatcgttttcatgcagtcgggctacaac
gtgtactcgctccagcaggcggcacgccgctcctggcgcatcggacagaaacagccggtg
cgcgtgatctacctgggctacgccggttcctcgcagatgacctgcctggagctgatggcc
aagaagatcatggtctcgcagtccacctcgggcgacgtgcccgaatcgggcctcgatgtg
ctcaaccaagacggtgattccgtcgaggtcgcactggcccggcaacttgtcgccgcctga
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