Castellaniella defragrans: BN940_07181
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Entry
BN940_07181 CDS
T03058
Name
(GenBank) SSU ribosomal protein S1p
KO
K02945
small subunit ribosomal protein S1
Organism
cdn
Castellaniella defragrans
Pathway
cdn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BN940_07181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cdn03011
]
BN940_07181
Ribosome [BR:
cdn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BN940_07181
Bacteria
BN940_07181
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
GCS
Cofilin_ADF
TOBE
TOBE_2
Motif
Other DBs
NCBI-ProteinID:
CDM23903
UniProt:
W8WVY4
LinkDB
All DBs
Position
1526618..1528345
Genome browser
AA seq
575 aa
AA seq
DB search
MDLSFMSTLTTEAALGGESFADLFAASIKDQNMRSGEVISAEVVRVDHNFVVVNAGLKSE
AYIPLEEFLNDQGDLEVQGGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEQALESG
ELVNGTITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNN
VVLSRRAVLEASMGEEREKLLETLHEGAIVKGIVKNITDYGAFVDLGGIDGLLHITDMAW
RRVRHPSEVLQVGQEIEAKVLKFDQEKSRVSLGVKQLGEDPWIGLGRRYPQGTRLFGKVT
NLTDYGAFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLG
MKQCRPNPWEDFASNFKRGDKVHGAIKSITDFGVFVGLPGGIDGLVHLSDISWSETGEEA
VRNFKKGDEIDAVVLGIDTDKERISLGVKQLEGDPFNNFVATYDKGAVLSGTVKSVEPKG
AVVTLSVDVEGYLRASEISAGRVEDATTVLHAGDQVEAMIINIDRKARSIQLSIKARDNA
ETAETIQRMTEASASSGTTNLGALLKAKLDQQRDE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatctatcgttcatgtccacccttaccaccgaagccgccctgggcggtgaaagcttt
gccgatctgtttgccgccagcatcaaggatcagaacatgcgctccggcgaggtcatctcc
gccgaagtcgtgcgcgtcgaccacaatttcgtcgtggtcaacgccggcctcaagtccgag
gcctacatccccctcgaagaattcctgaacgaccagggcgacctggaagtgcagggcggg
gacttcgtctccgtcgccatcgattccctggaaaatggctacggcgacaccatcctgtcg
cgcgaccgcgccaagcgcctgtcggcctggctgcagctcgaacaggccctggaatccggc
gaactggtcaacggcaccatcaccggcaaggtcaagggcggcctgacggtcatgaccaac
ggcatccgcgccttcctgccgggctcgctggtcgatctgcgtcccgtcaaggacaccacc
ccctacgaaggcaagaccctcgaattcaaggtcatcaagctcgaccgcaagcgcaacaac
gtcgtgctgtcgcgccgcgccgtgctcgaagccagcatgggcgaggaacgcgaaaagctg
ctcgaaacgctgcacgaaggcgccatcgtcaagggcatcgtcaagaacatcaccgactac
ggcgcgttcgtggacctgggcggcatcgacggcctgctgcacatcaccgacatggcctgg
cgccgtgtccgccacccctccgaagtgctgcaggtgggccaggaaatcgaagccaaggtc
ctcaagttcgaccaggaaaaatcccgcgtctcgctgggcgtcaagcagctgggcgaagat
ccctggatcggcctgggccgccgctacccgcaaggcacccgcctgttcggcaaggtcacc
aacctcaccgactacggtgcgttcgtcgaagtcgaagccggcatcgaaggcctggtgcac
gtctccgaaatggactggaccaacaagaacgtcgatccgcgcaaggtcgtgaccctgggc
gaagaagtcgaagtcatggtcctggaaatcgacgaagaccgccgccgcatctcgctgggc
atgaagcagtgccgcccgaacccctgggaggatttcgcctccaacttcaagcgcggcgac
aaggtccacggcgccatcaagtcgatcaccgacttcggcgtgttcgtcggcctgcccggc
ggcatcgacggcctggtgcacctgtccgacatctcctggtccgagaccggcgaagaggcc
gtgcgcaacttcaagaagggcgacgagatcgacgccgtggtgctgggcatcgacaccgac
aaggaacgcatctccctgggcgtcaagcagctcgaaggcgatccgttcaacaacttcgtg
gccacctacgacaagggcgccgtcctgtcgggcaccgtgaagtccgtcgaacccaagggc
gccgtcgtgacgctgtccgtggacgtcgaaggctacctgcgcgcctcggaaatctccgcc
ggccgcgtcgaggacgccaccacggtcctgcacgccggcgaccaggtcgaagccatgatc
atcaacatcgaccgcaaggcgcgttcgatccagctgtcgatcaaggcccgcgacaacgcc
gagacggccgaaaccatccagcgcatgaccgaagccagcgcctcgtcgggcaccaccaac
ctgggcgccctgctgaaggccaagctcgaccagcagcgcgacgagtga
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