Castellaniella defragrans: BN940_07586
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Entry
BN940_07586 CDS
T03058
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
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Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_07586
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BN940_07586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_10
AAA_30
TrwB_AAD_bind
AAA_16
T2SSE
FtsK_SpoIIIE
AAA_19
AAA_28
CbiA
AAA_6
Motif
Other DBs
NCBI-ProteinID:
CDM23982
UniProt:
W8X352
LinkDB
All DBs
Position
complement(1603799..1605325)
Genome browser
AA seq
508 aa
AA seq
DB search
MADPLIIARNADVQAALLPQLANRHGCITGATGTGKTVTLQVLAESFSRIGTPVFMADVK
GDLSGISQAGAASPKLARRLADLGLPEPAWGASPTTLWDIFGAQGHPIRATVSDLGPLLL
ARMLDLNDTQEGVLNLAFRVADDEGLLILDLKDLRAMLQHVADHAAELRTRYGQVSAASI
GAIQRSLLRLESEGADTFFGEPMLDVFDWMRTDAQGRGMVNILAADRLMQSPRLYAVFLL
WMLADLYERLPEVGDLDKPKLVFFFDEAHLLFKDAPAALLEKIEQVVRLIRSKGVGVYFV
SQNPADIPDTVLGQLGHRVQHALRAYTPRDQKAVRTAAQTMRPNPGLDIEAAITELAVGE
ALVSLLDSKGQPTPTQRVWMAAPGSRIGPATAAERQALLGASMLAGKYDQALDRESAYEI
LLRRAQSGEAAPAGTRGAAADGTGRAEAPAGEGNGIAGVLGDFLFGSTGPRGGRRDGVVQ
SVAKSMVRNAANQLVRGLLGSLVGGRRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcccctgatcatcgcccgcaacgccgacgtccaggccgccctgctgccccag
ctggccaaccgccacggctgcatcaccggcgccaccggcaccggcaagaccgtcaccctg
caggtcctggccgaatcgttctcccgcatcggcacgccagtcttcatggccgacgtcaag
ggcgatctctcgggcatctcgcaggcgggcgccgcctcgcccaagctcgcccggcgcctg
gccgacctgggcctgcccgagcccgcctggggcgccagcccgacgacgctctgggacatc
ttcggcgcgcagggccacccgatccgcgccacggtgtccgacctggggccgctgctgctg
gcgcgcatgctggacctgaacgacactcaggaaggcgtgctgaacctggccttccgcgtc
gccgacgacgagggcctgctgatcctggacctgaaagacctgcgcgccatgctgcagcac
gtggccgaccacgccgccgaattgcgcacccgctacggccaggtgtccgccgcgtccatc
ggcgccatccagcgcagcctgctgcgcctggaatccgaaggcgccgacaccttcttcggc
gagcccatgctcgacgtcttcgactggatgcgcaccgacgcccaggggcgcggcatggtc
aacatcctggccgccgaccggctgatgcagtccccgcgcctgtacgccgtcttcctgctg
tggatgctggccgacctgtacgaacgcctgccggaagtgggcgacctggacaagcccaag
ctggtgttcttcttcgacgaggcccatttgctgttcaaggacgcgcccgccgccctgctg
gaaaagatcgagcaggtcgtgcgcctgatccgctccaagggcgtgggcgtgtatttcgtc
agccagaacccggccgacatccccgacaccgtgctgggccagctgggccaccgcgtgcag
catgccctgcgcgcctacaccccgcgggaccagaaggccgtcaggaccgccgcgcagacc
atgcggcccaatcccgggctggacatcgaggccgcgatcaccgaactggccgtgggcgag
gccctggtgtccctgctggactccaagggccagcccacccccacgcagcgcgtctggatg
gccgcgcccggcagccgcatcgggccggccacggcggcggaacgccaggccctgctgggc
gcctccatgctggccggcaagtacgaccaggcgttggaccgcgaatccgcctacgagatc
ctgctgcggcgcgcccagtccggggaggccgcgcccgccgggacgcgcggcgccgccgct
gacggcaccggccgcgccgaggcgcccgcaggcgagggcaacggcatcgccggcgtcctg
ggcgatttcctgttcggctccaccgggccgcgcggcggacgccgcgacggggtggtgcag
tcggtcgccaagagcatggtgcgcaacgccgccaaccagctggtgcgcggcctgctgggc
tcgctggtcggcggccggcggcgctga
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