Castellaniella defragrans: BN940_07611
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Entry
BN940_07611 CDS
T03058
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdn03032
]
BN940_07611
03036 Chromosome and associated proteins [BR:
cdn03036
]
BN940_07611
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_07611
DNA replication proteins [BR:
cdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN940_07611
Chromosome and associated proteins [BR:
cdn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN940_07611
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN940_07611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Rho_N
Motif
Other DBs
NCBI-ProteinID:
CDM23986
UniProt:
W8X3U9
LinkDB
All DBs
Position
complement(1609162..1609521)
Genome browser
AA seq
119 aa
AA seq
DB search
MAATDHHPSNVWRIVRQATINLRGISSMNKTELIEHISSKTDLSKADVGRALEAFVGAVK
TTLKKKGSVTLVGFGTFAVSERAARTGRNPRTGEEIKIKKARVPKFRPGKALKDAVNAK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcgacagaccatcatccatcaaacgtctggcggatcgtccgccaggccacaata
aacctcaggggtatttcatcaatgaacaagaccgagctgatcgagcatatttcctccaag
accgatctctccaaggccgacgtgggccgcgccctggaagccttcgtgggcgccgtgaag
accaccctgaagaagaagggctcggtcactctggtgggcttcggcaccttcgccgtgtcc
gagcgcgccgcgcgcaccggccgcaatccgcgcaccggcgaggaaatcaagatcaagaag
gcccgcgtgccgaagttccgtccgggcaaggccctgaaggacgccgtgaacgccaagtaa
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