Castellaniella defragrans: BN940_07831
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Entry
BN940_07831 CDS
T03058
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00260
Glycine, serine and threonine metabolism
cdn00460
Cyanoamino acid metabolism
cdn00630
Glyoxylate and dicarboxylate metabolism
cdn00670
One carbon pool by folate
cdn00680
Methane metabolism
cdn01100
Metabolic pathways
cdn01110
Biosynthesis of secondary metabolites
cdn01120
Microbial metabolism in diverse environments
cdn01200
Carbon metabolism
cdn01230
Biosynthesis of amino acids
cdn01240
Biosynthesis of cofactors
cdn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN940_07831
09102 Energy metabolism
00680 Methane metabolism
BN940_07831
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN940_07831
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BN940_07831
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN940_07831
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BN940_07831
Enzymes [BR:
cdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BN940_07831
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CDM24029
UniProt:
W8WWS5
LinkDB
All DBs
Position
complement(1668672..1669925)
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AA seq
417 aa
AA seq
DB search
MFSGNERIQGFDDELWAAIEAEDHRQEQHIELIASENYASPRVMQAQGTKLTNKYAEGYP
GKRYYGGCEHVDVVEQMAIDRTCELFGADWANVQPHSGSQANMAVYLALMQPGDTLLGMS
LAHGGHLTHGAKVSSSGRLYRAIQYGLNADDLVDYDEVERLAMEHRPRMIVAGFSAYSQV
LDFPRFRAIADKAGALFMVDMAHFAGLVAAGLYPNPVPHADVVTTTTHKTLRGPRGGLIM
GRANPEIQKKIQSAVFPGAQGGPLMHVIAAKAVALKEAMQPEFRAYQQQVLDNARAMAEV
FVKNGLRIVSGGTHDHLFLVDLTAKGITGKAADAALGAAHITVNKNAVPNDPQPPFVTSG
IRIGSPAITTRGFKTEEARLLADWICEILDDMDNADTIARIRAQVIDLCARFPVYRG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaggcaacgaacgcatccagggtttcgatgacgaactgtgggccgccatcgag
gcggaagaccaccgccaggaacaacacatcgaactgatcgcgtcggagaactacgccagc
ccgcgggtcatgcaggcccagggcaccaagttgaccaacaaatacgccgagggctatccc
ggcaagcgttactacggcggctgcgagcacgtggacgtcgtcgagcagatggccatcgac
cgcacctgcgagctgttcggcgccgactgggccaacgtgcagccccattcgggctcccag
gccaacatggccgtctacctcgctctgatgcagcctggcgacaccctgctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtcagttcctcgggccggctctac
cgtgccatccagtacggcttgaacgccgacgacctggtcgactacgacgaagtcgaacgc
ctggccatggaacacagaccgaggatgatcgtagccggtttctccgcctattcgcaggtg
ctcgattttccgcgctttcgcgccatcgccgacaaggcgggcgcgctgttcatggtggac
atggcccatttcgccggcctggtggcggcgggcctctaccccaatccggtgcctcatgcc
gacgtggtaacgaccacgacgcacaagaccttgcgcggtccgcgcggcggcctgatcatg
ggccgcgccaaccccgagatccagaaaaaaatccagtcggccgtgtttccgggcgcgcag
ggggggccgctgatgcacgtcatcgcggccaaggccgtggccttgaaagaggccatgcag
ccggaatttcgtgcctaccagcagcaggtcctggacaatgcccgggccatggccgaggtc
ttcgtcaaaaacgggctgcgcatcgtttcaggcggcacgcacgaccacctgttcctggtg
gacctgactgccaagggcatcaccggaaaggccgccgacgcggcgctgggcgctgcccac
atcacggtcaacaagaacgcggtgccaaacgacccccaaccccccttcgtgaccagcggc
atccgcatcggctcgcccgccatcacgacgcgcggcttcaagaccgaagaggcgcgcttg
ctggccgactggatctgcgagattctcgacgacatggacaacgcggacaccatcgctcgc
attcgcgcgcaggtgatcgacctgtgcgcccgcttcccggtctaccgcggctga
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