Castellaniella defragrans: BN940_07906
Help
Entry
BN940_07906 CDS
T03058
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00260
Glycine, serine and threonine metabolism
cdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN940_07906
Enzymes [BR:
cdn01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN940_07906
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN940_07906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
Pyr_redox
HI0933_like
DAO
GIDA
Thi4
FAD_binding_3
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CDM24044
UniProt:
W8WWU3
LinkDB
All DBs
Position
1684245..1687226
Genome browser
AA seq
993 aa
AA seq
DB search
MPQGGRVRRGAPVRFTFNGKAYTGLQGDTLASALLANGVHFVARSFKYHRPRGIMTAGVE
EPNALVQLESGAYTVPNARATEVELYEGLRATSVNAKPDIEHDRMAIMQRFARFIPAGFY
YKTFMWPRSWWGKYEERIRDAAGLGSVPDTQDPDRYEKRYAHCDVLVVGAGPAGLAAACA
AGRTGARVILVDDAGEAGGSLLRAQEVIDDKPALDWVAERMAELAAQPETQVLQRTTAFG
YQDHNLVTACERLHDHLPIMQRSGVRERIWKIRARHVVLATGAHERPLVFGNNDIPGVML
AGAVSAYIHRYGVLPGRRAVVFTNNDSAYQCAVDLKRHGADVTIVDPRVLSSGTLPAEAE
RLGIPVVHQAVVAEARGGKHVTGVRLRGHGASLRDGVDTLSCDLLATSGGWNPVIHLYAQ
SRGKPRWCDERACFVPDASAQPQSSAGAANGDFSLQAALDGGARAGLQAAEGAPAARPAD
LPVWSARPVEVAPLLPLWAVGKGKQATRGPKQFIDYQNDVSVSDILLAVSEGYHSVEHVK
RYTAMGFGTDQGKLGNINGMGVLAEALKQSIPATGTTTFRPNYTPVSFGAVAGRELGDWF
DPIRRTCLHDWNLEQGAIFEDVGNWKRAHYYPKPGEDMHAAVQRECLAVRNSVGLLDYST
LGKIDVRGPDAVEFLNRLYINSWTKLQPGRCRYGLLLDENGMVMDDGVSIRLAEDHFLLT
TTTSGAARIMSWMERWLQTEWPDLRVYLTSVTDQYAVATVAGPHARKVLSAVCKDIDFSN
EAFPFMSFQEGTIDGVFARVLRVSFSGELSYEVYMPANMGRHVVERLMTAGQPHGITPYG
TETMHVLRGEKGYIIVGQDTDGSVTPMDLGMGGMLAKNKDCLGKRSLARSHTSGPGRKQF
VGLLANDPACVLPEGGQILLGPTQAAIAPMFGHVTSSYMSPILGRSIALALLKDGHERMG
EEVTVATADGRFMPARVCSPVFYDPEGARQNVE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
ttgccccagggtggccgtgtgcggcgcggcgcgccggtgcgcttcacgttcaatggcaag
gcctataccggcctgcaaggagacacgctggcgtcggccctgctggccaatggcgtgcat
tttgtggcacgcagtttcaagtaccaccgcccgcgcggcatcatgaccgccggagtcgaa
gagcccaatgcgctggtgcagctggaaagcggcgcgtatacggtgcccaacgcgcgtgcg
accgaggtcgaactctatgagggcttgcgcgcgaccagtgtcaacgccaagccggacatc
gagcatgaccgcatggcgatcatgcagcgctttgcacgcttcatcccggcggggttctat
tacaagaccttcatgtggccgcgcagctggtggggcaaatacgaggaacggatccgtgac
gccgcaggcctgggctcggtgcccgacactcaggatcctgatcgctacgagaagcgctat
gcgcactgcgatgtgctggtcgtgggggccgggccggcggggctggcggctgcctgcgcg
gcaggccgcaccggtgcccgggtcattctggtggatgatgctggcgaggcggggggcagc
ctgttgcgcgcccaggaagtcatcgacgacaaacccgcgctggattgggtagccgaacgc
atggcggaattggctgcccagccggaaacacaggtgctgcagcgcaccaccgcgtttggc
taccaggatcacaatctggtcaccgcctgcgagcggctgcacgaccatctgccgatcatg
cagcgcagtggcgtacgcgaacgcatctggaaaatccgggcccggcatgtggtgctggcg
accggcgcccatgaacggccgctggtattcggcaacaacgatatcccgggcgtgatgctg
gccggtgccgtatccgcttacattcaccgctacggcgtgctgccaggccgccgtgccgtc
gtgttcaccaacaacgacagcgcctatcagtgcgcggtcgatctcaaacgtcatggcgcg
gatgtcaccatcgtcgatccgcgggtgctcagcagcggtaccctgccggccgaggccgaa
cggctgggaattccggtggtgcaccaggccgtcgtagccgaggcgcgcggcggcaagcac
gtgactggtgtgcgcctgcggggccatggcgccagtctgcgcgatggcgtcgatacgctg
tcctgcgatctgctggcgacatccggtggctggaatcccgtcatccacctgtatgcccag
tcgcgcggcaagccgcgctggtgtgatgagcgtgcctgtttcgtgccggatgcgtccgcc
cagccgcaaagcagtgcgggtgccgccaacggcgatttcagtctgcaggcggcgctggat
ggcggcgcgcgtgcgggcctgcaggcggccgaaggcgctccagccgcccggcccgcggat
cttcccgtgtggtctgccaggccggtcgaggttgcgcctttgctgccgctgtgggctgtc
ggcaagggcaagcaggccacccgtggtccgaagcagttcatcgattaccagaacgatgtc
tcggtatccgacatcctgctggcggtcagcgagggctaccactcggtcgagcacgtcaag
cgctatacggccatgggcttcggtaccgaccagggcaagctgggcaacatcaacggcatg
ggggtgctggctgaagccttgaagcaaagcattccggcaaccgggaccacgacattccgt
cccaactacacgccggtcagcttcggcgccgtggctggacgcgaactgggcgattggttc
gatccgatccgccgtacctgcctgcacgactggaatctggaacaaggcgccatcttcgag
gatgtgggcaactggaagcgcgcccattactacccaaaaccgggtgaagacatgcacgcg
gcggtgcagcgcgaatgcctggccgtgcgcaacagcgtcggcctcctggattacagcacc
ctgggcaagatcgacgtgcgcggcccggatgcggtcgagttcctcaatcgcctgtacatc
aattcctggaccaagctgcagcctgggcgctgccgttacggcctgctgcttgatgagaac
ggcatggtcatggacgatggcgtgagcatccgtctggctgaggatcatttcctgctgacc
actaccaccagcggcgcggcccgcatcatgagctggatggagcgctggctgcagactgaa
tggccggatctgcgggtctatctgacctcggtgacggaccagtatgccgtggcgaccgtg
gctggtccccatgcccgcaaggtgctttccgccgtctgcaaggacatcgatttcagcaat
gaggccttccctttcatgagtttccaggaaggcaccatcgatggcgtgtttgcccgtgtc
ctgcgcgtgagcttttccggcgagctatcctacgaagtctatatgccggccaatatgggc
cgccacgttgtcgagcggctgatgacggctggccagccccacggcatcacgccctacggc
accgagaccatgcacgtcctgcgcggcgaaaaaggctacatcatcgtcggtcaggacacc
gacggttcggtcactccgatggatctgggcatgggcggtatgctggcaaaaaacaaggac
tgcctgggcaagagatctctggcgcgcagccacaccagcggtcctgggcgcaagcagttc
gttggtttgctggccaatgatcccgcctgcgtgttgccggaaggcggccagattctgctg
ggtccgacccaggcggccatcgctccgatgttcggtcacgtgacttccagctatatgagt
ccgatcctgggccgatccattgcgctcgccctgctcaaggatggccatgagcggatgggt
gaagaagtcacagtagccacggccgatggtcgattcatgccggcgcgcgtctgcagcccg
gtgttctacgatcccgaaggagcccgtcaaaatgttgaatga
DBGET
integrated database retrieval system
