Castellaniella defragrans: BN940_08856
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Entry
BN940_08856 CDS
T03058
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN940_08856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_08856
Enzymes [BR:
cdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BN940_08856
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BN940_08856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CDM24234
UniProt:
W8WXE7
LinkDB
All DBs
Position
complement(1904297..1905277)
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AA seq
326 aa
AA seq
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MSFMSTLVDTLSWISAAASGRRPFPVHGQRAGPGDLADTIAASAHPDAASSNALKLGSQK
ANPHTMKLATWNVNSLNVRLGHVLDWLRANPVDALCLQELKLPDEKFPREALLDAGYHAC
WAGQKTYNGVAILSRTPLLDVQRNIPGYDDPQQRIIAATLPGPDGRLVRVVSAYCPNGQA
VGCDKYAYKLDWFQALRGWLGEEMGRHPELAILGDYNVAPADEDVHDPAAWAGGILVSDP
ERQAFRDLLGLGLQDTFRLFDQPPRTFSWWDYRQMGFRRNAGLRIDHILATPALAARCLE
CAVDKAPRGWDKPSDHAPVVATFGLA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcatgtccaccttggttgacaccctgagctggatcagcgcggccgcgtccggg
cggcgcccattccccgttcatggccaacgggcgggaccaggcgacctggctgataccata
gcggcatccgcgcatccggacgccgcatcttccaatgccctgaaactgggtagccaaaaa
gcaaatcctcataccatgaaactcgccacctggaacgtcaattccctgaacgtccgcctg
ggccacgtcctggactggctgcgggccaatccggtcgacgcgctgtgcctgcaggaactg
aagctgccggacgagaaattcccgcgcgaagccctgctggacgccggctaccacgcctgc
tgggcgggacagaagacctacaacggcgtggcgatcctgagccggacgccgctgctggac
gtgcagcgcaacatccccggctacgacgacccccagcagcgcatcatcgccgccaccctg
cccggcccggatgggcggctggtgcgcgtcgtcagcgcctactgccccaacggccaggcg
gtgggctgcgacaaatacgcctacaagctggactggttccaggcgctgcgcggctggctg
ggcgaggaaatgggccgccacccggaactggcgatcctgggggactacaacgtggccccg
gccgacgaggacgtgcacgacccggccgcctgggccggcggcatcctggtctccgatccc
gagcgccaggccttccgcgacctgctgggtctgggcctgcaggacacgttccgcctgttc
gaccagccgccgcgcaccttcagctggtgggattaccgccagatgggcttccggcgcaac
gccggcctgcgcatcgatcacatcctggcgacgccggcgctggcggcgcgctgcctcgaa
tgcgcggtggacaaggcgccgcgcggctgggacaagccctcggaccacgcgccggtggtg
gccaccttcggcctcgcctga
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