Castellaniella defragrans: BN940_09016
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Entry
BN940_09016 CDS
T03058
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BN940_09016
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdn01007
]
BN940_09016
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdn03016
]
BN940_09016
Enzymes [BR:
cdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BN940_09016
Amino acid related enzymes [BR:
cdn01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BN940_09016
Transfer RNA biogenesis [BR:
cdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BN940_09016
Prokaryotic type
BN940_09016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
CDM24265
UniProt:
W8X961
LinkDB
All DBs
Position
1937753..1940158
Genome browser
AA seq
801 aa
AA seq
DB search
MQFPESWLRAWADPDIDGQELAHRLTMAGLEVEDADPYAPPFSGVVVARIESAEPHPNAD
KLRVCRVDDGSGEPLQIVCGAPNAAAGLLVPLARLGAELPGGLRIGPVKMRGIESRGMLC
SARELGLSQDHAGLLELPAGLEPGQDLRQALDLDDTIYTLKLTPNRADCLSILGVAREVA
ALTGCALRAPDVPRVPVTIDDRLPVTVQAPDLCGRFAGRIVRGVNARAATPAWIRSRLER
AGQRPVSALVDISNYIMLELGRPTHVFDLSKVQGGLTVRWAREGERLELLNDQTVDLTPD
VGVIESGRGLESLAGIMGGQDSAVTLETTDVYLEAAFWWPEAIMGRPRRYKLNSEAGHRF
ERGVDFSTIPEHLELMTALVLDVCGGQAGPLDDQVVNLPAREPVRMRLARCARVLGIPLD
AEAVGAVFTRLGFAYERQGDDFVVTPPAARFDLTIEEDLIEEVARIHGFDRIPDRPPVAP
AVMRAVPETRCGPHALRAALAARDYQEVINFSFVEEAWERDYCGNADPIRLLNPIASQLA
VMRSSLIGGLLANIAYNAKHRQTRVRVFELGRVFARDASVADGGLAVAGVAQPTRLAAAA
WGPALAEQWGEPARPVDFFDVKRDLEALLGARAAELRCEAAGHPALHPGRSARLLLGGRA
IGWLGEVHPRWAQALDLPHAPVVFEIDAEAVSERIFPHPQELSRQPVAVRDLAIWVDADV
PWQSLLDTLRQRIAADGALSVVKDIKLFDIWREAATARQRSLALRLWFQGRDATLEDRQV
EHCVQSLLAALAETHGARLRS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcccgaatcatggctgcgcgcctgggccgatcccgacatcgacggccaggaa
ctcgcccatcggctgaccatggccggcctcgaagtcgaggacgccgacccctacgctccg
ccgttctccggcgtggtggtggcgcgcatcgaatcggccgagccgcatccgaatgccgac
aagctgcgcgtctgccgggtcgatgacggctcgggcgagccgctgcagatcgtctgcggc
gcgcccaacgcggcggccgggctgctggtgcccctggcgcggctgggcgccgaactgccg
ggcggcctgcgcatcggcccggtcaagatgcggggcatcgaatcgcgcggcatgctgtgc
tcggcccgcgaactgggcctgtcccaggaccacgccggcctgctcgaactgcccgccggt
ctggagccgggccaggacctgcgccaggcgctggacctggacgacacgatctacaccctg
aagctgactcccaaccgggccgactgcctgtccatcctgggggtggcgcgcgaagtcgcg
gcgctcaccggctgcgcgctgcgcgcgccggacgttccccgggtgccggtcaccatcgac
gaccgcctgcccgtgaccgtgcaggcgccggacctgtgcggccgcttcgccgggcgcatc
gtgcgcggcgtgaacgcccgcgccgccacgcccgcgtggatcaggtcgcgcctggagcgc
gccggccagcggccggtgtcggcgctggtggacatctccaactacatcatgctggagctg
ggccgtcccacgcacgtcttcgacctgtccaaggtccagggcggcctgaccgtgcgctgg
gcgcgtgagggcgaacggctggaactgctcaacgaccagaccgtcgatctgacgcccgac
gtgggcgtcatcgaaagcggccggggcctggaaagcctggccggcatcatgggcgggcag
gattcggccgtgacgctggagaccaccgacgtctacctggaagccgccttctggtggccg
gaggccatcatgggccggccgcgccgctacaagctcaattccgaggccggccaccgcttc
gagcgcggcgtggacttctccaccattcccgagcacctggagctcatgacggccctggtc
ctggacgtctgcggcggccaggccggtccgctggacgaccaggtcgtcaacctgcccgcg
cgcgagccggtgcgcatgcgcctggcgcgctgcgcccgcgtgctgggcatcccgctggac
gccgaggccgtcggcgccgtcttcacgcgcctgggcttcgcctacgagcgccagggcgac
gatttcgtcgtcacgccgccggcggcgcgcttcgacctgacgatcgaggaagacctgatc
gaggaagtcgcccgcatccacggcttcgaccgcattcccgaccggcccccggtggcgccg
gccgtcatgcgggcggtgcccgagacccgctgcggcccgcacgcgctgcgcgccgccctg
gccgcgcgggactaccaggaagtcatcaatttctccttcgtcgaggaagcctgggaacgc
gactactgcggcaacgccgaccccatccggctgctcaatcccatcgccagccagctcgcg
gtgatgcgctccagcctcatcggcggcctgctggccaacatcgcctacaacgccaagcat
cgccagacgcgcgtgcgggtgttcgagctgggccgtgtgttcgcccgcgatgcctcggtg
gccgacggcggcctggccgtcgcgggcgtggcccagccgacccgcctggccgccgcggcc
tgggggccggccctggcggaacaatggggcgagccggcgcggccggtggacttcttcgac
gtcaagcgcgatctcgaagccctgctgggcgcgcgcgcggccgaactgcgctgcgaggcc
gccggccatcccgcgctgcatccgggccgcagcgcccgcctgctgctgggcggccgcgcg
atcggctggctgggcgaggtccatccgcgctgggcccaggcgctcgatctgccgcacgcc
cccgtggtcttcgagatcgacgccgaagccgtatccgaacgtatcttcccccatccgcag
gagctgtcccgccagcccgtggcggtgcgggatctggcgatctgggtggatgcggacgtg
ccgtggcagtcgctgcttgatacactgcggcagcggatcgcggccgacggcgccctctcc
gtggtcaaagacattaaactgttcgacatctggcgcgaagccgcgaccgcccggcagcgc
agcctggcgctgcgcctctggttccagggacgcgatgcgacgctggaggaccgccaggtc
gaacactgcgtgcaaagcctgctcgccgccctggccgagacgcatggcgcgcgcctgcgc
tcatag
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