KEGG   Castellaniella defragrans: BN940_09711
Entry
BN940_09711       CDS       T03058                                 
Name
(GenBank) Collagen triple helix repeat
  KO
K08086  pilus assembly protein FimV
Organism
cdn  Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cdn02044]
    BN940_09711
Secretion system [BR:cdn02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   BN940_09711
SSDB
Motif
Pfam: FimV_N Collagen LysM DUF2975 Glycophorin_A
Other DBs
NCBI-ProteinID: CDM24402
UniProt: W8X3U0
LinkDB
Position
2090306..2092414
AA seq 702 aa
MKKGPHAAPSAGRVHAALPARIRFAAGALALAFLTGGAAQAATFGHARLASGAGEPLLIL
VPVSGLTDADVQALSARPAPAADWAQAGLTPPVPLDSLSVSVGADVRPDGRRVLRIGSGQ
AFDGTLADLLLDVRTATGAQRYQVSLVAPGPARAAAPAAAAAPAGQGGASATAVGAAPHT
STRRVPAGAIAVRRGDTMFAISRRHAVDGVTIYQLMMALQRANPQAFIHGNVNLVRAGAS
LAVPDINDMLSISDAEARRQFQVQAAAFARMRARQAGTAAAAGAGQASAGAVSQDESRAQ
AEPAASAGDRLRLSEAGRGGADAAADARAARGHALKDAESRVGQLESNVQNLNQALQAQG
EAARSAVAQGAAAIGQSIQEVASAISEASQEAAAQADEAVSAGGEAGASGAPGASGTPGA
AGTKGAPGAKGASGAAAAAGASGASGAPAASKASGGSNASGASNASGASNASGTPGSAGA
AGSTAGSSGSAGTAGSPGASGAQGATQVPGAAGAPGAGTGAAAAGTQAGSMAGGGAASAG
GAAASGAGANSGAGVNSGAGANGTAGAAGAPGSQAAGSSANTAGAPATGSAVAGSGSTAA
AGTGTAAAGSAGSAPNPAALAAELQPSERAQHRASWLQDHLLGVMTGLLALIVLIIAWLL
RRANAARDEADATPRVTESMVRERIQDIDLDLEPGESRPPRS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgaaaaagggcccccacgctgcaccttcggccggccgcgtccacgctgcgcttccggcg
cgcatccgcttcgcggccggcgcgctggcgctggctttcctgacgggcggggcggcccag
gcggcgactttcgggcatgcgcgcctggcctcgggcgccggcgagccgctgctgatcctg
gtgccggtgtcgggcctgacggacgccgatgtgcaggcgctgtcggcccggcccgcgccg
gcggccgactgggcgcaggccggcctgacgccgccggtgcccctggacagcctgtccgtt
tccgtcggtgccgacgtccggcccgacgggcgccgcgtcctgcgcatcggctccgggcag
gccttcgacggcacgctggccgacctgctgctggacgtgcgcaccgccaccggcgcgcag
cgctaccaggtctcgctggtggcgccggggccggcccgcgccgccgcacctgccgccgcc
gcagcaccggcggggcagggcggcgcttcggcgactgccgtgggggcggcgccgcacacc
agcacccggcgggtgccggccggtgccatcgcggtgcgccgcggcgacacgatgttcgcc
atcagtcgccgccatgcggtcgatggcgtaaccatctaccaattgatgatggcgctgcag
cgcgccaatccgcaggccttcatccacggcaacgtcaacctggtgcgcgccggcgcgtcg
ctggcggtgccggacatcaacgacatgctgtcgatttccgacgccgaggcgcggcgccag
ttccaggtccaggccgccgccttcgcgcggatgcgcgcgcgccaggccggcacggcggcc
gcggcgggcgcgggccaggcctcggccggcgccgtctcgcaggatgaatcgcgcgcgcag
gccgagcccgccgcatcggcgggcgaccgcctgcgcctgagcgaagccgggcgcggcggc
gccgatgcggcggccgacgcccgcgcggcgcgcggccatgccctgaaggatgccgaatcg
cgggtcggccagctcgaaagcaacgtccagaacctgaaccaggcgctccaggcccagggc
gaggctgcgcgcagcgccgtcgcccagggggccgcggccatcggccagtcgatccaggag
gtcgccagcgcgatcagcgaagccagccaggaagccgccgcccaggccgacgaagcggtc
tcggcgggcggcgaagccggggcttccggcgcgcccggcgcctcggggactccgggcgcc
gccggtacgaaaggggctcccggtgcgaagggagcttccggtgccgcggccgctgcgggg
gcttcaggcgcatcgggtgccccggctgcgtccaaggcctcgggtggatccaatgcttcg
ggtgcgtccaatgcttcgggcgcctccaatgcctccgggacgcccggttcggcaggcgca
gcgggctcgacggctggctcttcgggctcggcgggaactgccgggtctccgggtgcgtca
ggcgctcaaggcgctacgcaggttccaggcgctgcaggagctccgggcgccgggactggc
gcggccgcggccgggacccaggccggctccatggctggcggcggagccgcttccgccggc
ggtgcggctgcttcgggcgccggtgcgaattcgggcgccggtgtgaattcgggcgccggt
gcgaacggcacagccggtgcggccggtgcgcctggatcccaggccgccggatcgtccgcg
aacacggcgggcgccccggccaccggctccgccgtggcgggctccggctccacagccgca
gcaggcaccggcacggccgccgcgggatccgccggatcggcgcccaacccggccgccctg
gcggccgagctgcagccctccgagcgtgcccagcaccgggcctcgtggctgcaggaccac
ctgctgggcgtgatgacgggcctgctcgccctgatcgtgctcatcatcgcctggctgctg
cgccgggccaacgccgcccgggacgaggccgacgccaccccccgggtgaccgaatccatg
gtgcgcgagcggatccaggacatcgacctggatctcgaaccaggcgaatcgcgcccgccg
cggtcctag

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