KEGG   Castellaniella defragrans: BN940_09951
Entry
BN940_09951       CDS       T03058                                 
Name
(GenBank) Ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
cdn  Castellaniella defragrans
Pathway
cdn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN940_09951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdn03032]
    BN940_09951
Enzymes [BR:cdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     BN940_09951
DNA replication proteins [BR:cdn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     BN940_09951
   Elongation factors (archaeal)
     BN940_09951
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: CDM24450
UniProt: W8X998
LinkDB
Position
2148766..2149470
AA seq 234 aa
MATQPDLFGGPVAGDAQAPAAGRILVAGVDEAGRGPLAGPVYAAAVILDPDRPIEGLDDS
KKLSPERRESLAGLIRERALAWAIASASVEEIERLNILRATMLAMRRACLTLRHAPASIL
VDGNRLPEGLPCHARAVVGGDALEPAISAASILAKTARDACCLELHARYPQYAFDRHKGY
GTALHLARLAEFGPCPAHRRGFAPVRVLLDAGVAGRHAGHEVNGRQKARRGDAP
NT seq 705 nt   +upstreamnt  +downstreamnt
atggccacgcagcctgacctgttcggcggcccggtggcgggcgatgcgcaggcgccggcc
gccggccggatcctggtcgccggcgtggacgaagcggggcggggccccctggccggcccg
gtctacgccgccgccgtcatcctggacccggaccgtccgatcgagggcctggacgattcc
aagaagctcagccccgaacgccgggaatccctggccggcctgatccgcgaacgcgcgctg
gcctgggccatcgccagcgccagcgtcgaggagatcgagcggctgaacatcctgcgggcg
acgatgctggccatgcggcgcgcctgtctgaccctgcggcacgcgccggcgtcgatcctg
gtggacggcaaccgcctgcccgagggcctgccctgccatgcccgggccgtggtggggggc
gacgccctggagcccgcgatctccgccgcctcgatcctcgccaagaccgcgcgcgacgcc
tgctgcctggaactgcacgcgcgctacccgcaatacgccttcgatcgccacaagggctac
ggcaccgcgctgcatctggcccggctggccgaattcggcccgtgccccgcgcaccggcgc
ggcttcgccccggtgcgcgtcctgctggacgccggcgttgccgggcggcatgcgggccac
gaggtaaacggccggcagaaggcgcggcgcggggacgcgccatga

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