Castellaniella defragrans: BN940_12441
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Entry
BN940_12441 CDS
T03058
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cdn
Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdn03400
]
BN940_12441
DNA repair and recombination proteins [BR:
cdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN940_12441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
DUF7125
DnaB_C
GvpD_P-loop
ChlI
AAA_16
Rad51
Lon_C
AAA_24
AAA_14
nSTAND_NTPase5
nSTAND3
AAA_5
NTPase_1
MCM
SLFN-g3_helicase
ABC_tran
Zn_ribbon_tTFIIB
RecA_N
Zn_ribbon_PaaD
zinc_ribbon_6
PAXNEB
ATPase_2
DAP3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CDM24939
UniProt:
W8WZA5
LinkDB
All DBs
Position
complement(2683627..2684985)
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AA seq
452 aa
AA seq
DB search
MAKARTLFLCSDCGGTSAKWEGRCPHCGAWNTLQETRESPAGSSGHRYAPLAASTPVRRL
SDIEAREQARNPTGIEEFDRVLGGGLVAGAVVLIGGDPGIGKSTLLLQALASLSERGPVL
YVTGEESSEQVALRAQRLGVSGDGVDLLAEIRLEQITQALVERRPGVAVIDSIQTLYSGE
LTAAPGSVSQVRECAAQLTRIAKQTGVTLILIGHVTKDGALAGPRVLEHIVDTVLYFEGD
THSSFRLVRAIKNRFGAVNELGVFAMTDRGLRGVSNPSALFLAGHSREVAGSCVMATQEG
TRPLLVEVQALVDTAHVPNPRRLSVGLESSRLAMLLAVLHRHAGIATYDQDVFVNAVGGV
RIMEPAADLAVALAILSSMRDRPLPAGLLAFGEIGLAGEIRPAPRGQERLREAAKLGFGL
AVVPRANLPRQPIEGLRIQAVDRVEDVLGVLS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgcgcaccctgttcctctgctcggactgcggcggcacctccgccaagtgg
gaaggccgctgcccgcattgcggcgcctggaacacgctgcaggaaacccgcgaatcgccg
gcgggatcctccggccaccgctacgcgccgctggccgcctccactccggtgcgccgcctg
tccgacatcgaggcgcgcgagcaggcccgcaaccccaccggcatcgaggaattcgaccgc
gtgctgggcggcggtctggtggccggcgcggtggtgctgatcggcggcgacccggggatc
ggcaaatcgaccctgctgctgcaggcgctggccagcctgtccgaacgcggcccggtgctc
tacgtcacgggcgaggaatcctccgagcaggtcgccctgcgcgcccagcgcctgggcgtg
tcgggcgacggcgtggacctgctggcggagatccgcctggagcagatcacccaggccctg
gtcgagcgccggcccggcgtggccgtcatcgattccatccagaccctctattccggcgag
ctgaccgccgcgcccggctcagtgtcgcaggtgcgcgaatgcgccgcccagctcacccgc
atcgccaagcagaccggtgtcaccctgatcctgatcggccacgtcaccaaggacggcgcg
ctggccggcccgcgcgtgctggagcacatcgtcgacaccgtcctgtacttcgagggcgac
acccattcctcgttccgcctggtgcgggccatcaagaaccgcttcggcgccgtcaacgaa
ctgggcgtgttcgccatgaccgaccgaggcctgcgcggggtgagcaatccgtccgcgctg
ttcctggcgggacactcgcgcgaggtcgccggctcctgcgtcatggccacccaggaaggc
acccgtccgctgctggtcgaagtccaggccctggtggacacggcccacgtgcccaatccg
cgccgcctgtccgtgggcctggaaagcagccgcctggccatgctgctggccgtgctgcac
cgccacgcggggatcgccacctacgatcaggacgtcttcgtcaacgccgtgggcggcgtg
cgcatcatggagccggccgccgacctggccgtggccctggcgatcctgtcgtccatgcgc
gaccggccgctgccggccggcctgctggccttcggcgagatcggcctggcgggcgagatc
cgtccggccccgcgcggccaggaacgcctgcgcgaggccgccaagctgggcttcggcctg
gccgtcgtgccgcgcgccaatctgccgcgccagcccatcgagggcctgcgcatccaggcc
gtcgaccgcgtcgaggacgtgctcggcgtgctgtcctga
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