Castellaniella defragrans: BN940_12616
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Entry
BN940_12616 CDS
T03058
Name
(GenBank) Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00900
Terpenoid backbone biosynthesis
cdn01100
Metabolic pathways
cdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BN940_12616
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cdn01006
]
BN940_12616
Enzymes [BR:
cdn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BN940_12616
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BN940_12616
Prenyltransferases [BR:
cdn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BN940_12616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
GAP1-N2
Motif
Other DBs
NCBI-ProteinID:
CDM24974
UniProt:
W8WZD9
LinkDB
All DBs
Position
complement(2719386..2720303)
Genome browser
AA seq
305 aa
AA seq
DB search
MSAVAGNFDAWLRDRVDHTATVLDDLLPPAEDDPARLHEAMRYAVLGPGKRVRAALVYAA
GEASRTSNGTAAAQDLALDAAAAAVELIHAYSLIHDDLPCMDDDDLRRGRPTVHRQFDDE
ALAMLAGDALQPLAFDCLAQMPIAPALTVQAVRLLARAAGSEGMVGGQAIDCASVGQALP
IEALQHMHRMKTGALLEASVLLGGVVAGASSTVRAGLESYASAMGLAFQVVDDILDVTAD
SATLGKTAGKDAAQGKPTYVSIMGLDGSRELLAGLREQACAALLPLGPSACRLRELADYI
IGRSH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgtcgcggggaatttcgacgcctggctgcgcgaccgggtggatcacaccgcg
acggtgctcgacgacctgctgccgcccgccgaggacgatcccgcgcgcctgcacgaagcc
atgcgctatgccgtcctggggccgggcaagcgggtgcgggccgccctggtctacgccgcc
ggcgaagccagccgcacctccaacggcacggccgccgcccaggacctggcgctggacgcc
gccgccgccgccgtggagctgatccacgcctattcgctgatccacgacgatctgccctgc
atggacgacgacgacctgcggcgcggccggcccaccgtgcatcgccagttcgacgacgag
gcgctcgccatgctggccggggatgcgctgcagcccctggccttcgactgcctggcgcag
atgcccatcgcgccggccctgacggtccaggcggtccggctgctggcgcgcgcggcgggc
agcgagggcatggtcggcggccaggccatcgactgcgccagcgtcggccaggcgctgccg
atcgaggcgctgcagcacatgcaccgcatgaagaccggcgccctgctggaagccagcgtg
ctgctgggcggggtggtggccggcgccagcagcaccgtgcgcgccggcctggaatcctac
gcctcggccatgggcctggccttccaggtggtggacgacatcctggacgtgaccgccgat
tcggccaccctgggcaagaccgccggcaaggacgccgcccagggcaagccgacctacgtc
tccatcatggggctggacggctcgcgcgaactgctggccggcctgcgcgagcaggcctgc
gccgcgctgctgccgctggggccgtcggcctgccgcctgcgcgagctggccgactacatc
atcggcaggtcccattag
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